msh homeobox 1

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:235.40
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_031059
Gene ID 81710
Unigene ID Rn.18117
Probe set ID -
Ensembl ID ENSRNOG00000006876

Orthologous Gene

Human [0]  
Mouse [0]  

Chromosomal Region

14q21  [78,257,345  -  78,261,140]

Gene Family (Interpro ID)

IPR001356  Homeobox
IPR009057  Homeodomain-like
IPR012287  Homeodomain-related

Link to Pubmed  (Pubmed ID)

8696335
10332146
11390985
12807959
16451220
17030628
18222913
20339300

Gene Ontology  (GO ID)

Biological Process

GO:0009952  anterior/posterior pattern formation
GO:0030262  apoptotic nuclear changes
GO:0030509  BMP signaling pathway
GO:0060349  bone morphogenesis
GO:0051216  cartilage development
GO:0060536  cartilage morphogenesis
GO:0000902  cell morphogenesis
GO:0071316  cellular response to nicotine
GO:0042733  embryonic digit morphogenesis
GO:0035115  embryonic forelimb morphogenesis
GO:0035116  embryonic hindlimb morphogenesis
GO:0030326  embryonic limb morphogenesis
GO:0001837  epithelial to mesenchymal transition
GO:0003198  epithelial to mesenchymal transition involved in endocardial cushion formation
GO:0060325  face morphogenesis
GO:0030900  forebrain development
GO:0007507  heart development
GO:0003007  heart morphogenesis
GO:0001701  in utero embryonic development
GO:0010463  mesenchymal cell proliferation
GO:0030901  midbrain development
GO:0042474  middle ear morphogenesis
GO:0007517  muscle organ development
GO:0043066  negative regulation of apoptosis
GO:0030308  negative regulation of cell growth
GO:0008285  negative regulation of cell proliferation
GO:0043392  negative regulation of DNA binding
GO:0051154  negative regulation of striated muscle cell differentiation
GO:0000122  negative regulation of transcription from RNA polymerase II promoter
GO:0045892  negative regulation of transcription, DNA-dependent
GO:0042476  odontogenesis
GO:0042475  odontogenesis of dentine-containing tooth
GO:0060021  palate development
GO:0021983  pituitary gland development
GO:0043065  positive regulation of apoptosis
GO:0030513  positive regulation of BMP signaling pathway
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0034504  protein localization in nucleus
GO:0050821  protein stabilization
GO:0042481  regulation of odontogenesis
GO:0048863  stem cell differentiation

Cellular Component

GO:0005575  cellular_component
GO:0005634  nucleus
GO:0005667  transcription factor complex

Molecular Function

GO:0003677  DNA binding
GO:0003674  molecular_function
GO:0002039  p53 binding
GO:0043565  sequence-specific DNA binding