RAB6A, member RAS oncogene family

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:12 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:78.10 skin:-
GeneChip cerebrum:9.12 cerebellum:9.13 brain stem:8.58 corpus callosum/glia:- pineal gland:- peripheral nerve:9.14 spine:- retina:- eye:7.45 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:7.78 thymus:7.60 bone marrow:7.30 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:119.50 prostate:75.90 ovary:114.10 testis:- heart:77.60 muscle:- esophagus:- stomach:- intestine:- colon:579.70     liver/hepato:13.30        lung:50.70    bladder:- kidney:63.80 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:227.60 breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:7.34 muscle:7.58 esophagus:- stomach:- intestine:8.51 colon:8.78 liver/hepato:- lung:- bladder:- kidney:7.34 pituitary:8.92 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_053366
Gene ID 84379
Unigene ID Rn.16950
Probe set ID rc_AA799784_at  [RG_U34A]
Ensembl ID ENSRNOG00000018176

Orthologous Gene

Human[30]  NM_002869, NM_198896, NM_032144
Mouse[4]  NM_001163663, NM_024287, NM_032144

Chromosomal Region

1q32  [158,041,088  -  158,080,213]

Gene Family (Interpro ID)

IPR006688  ADP-ribosylation factor
IPR006689  ARF/SAR superfamily
IPR013684  MIRO-like
IPR002041  Ran GTPase
IPR013753  Ras
IPR001806  Ras GTPase
IPR020849  Ras small GTPase
IPR003579  Ras small GTPase, Rab type
IPR003577  Ras small GTPase, Ras type
IPR005225  Small GTP-binding protein
IPR020851  Small GTPase
IPR003578  Small GTPase, Rho type

Link to Pubmed  (Pubmed ID)

8807639
11062069
15483056
20003598
22871113

Gene Ontology  (GO ID)

Biological Process

GO:0048193  Golgi vesicle transport
GO:0006184  GTP catabolic process
GO:0018125  peptidyl-cysteine methylation
GO:0032781  positive regulation of ATPase activity
GO:0034067  protein localization in Golgi apparatus
GO:0000042  protein targeting to Golgi
GO:0032482  Rab protein signal transduction

Cellular Component

GO:0031410  cytoplasmic vesicle
GO:0005829  cytosol
GO:0005794  Golgi apparatus
GO:0000139  Golgi membrane
GO:0016020  membrane
GO:0005802  trans-Golgi network

Molecular Function

GO:0001671  ATPase activator activity
GO:0051117  ATPase binding
GO:0005525  GTP binding
GO:0003924  GTPase activity
GO:0019904  protein domain specific binding