collagen, type I, alpha 1

 詳細情報を見る

同義遺伝子名

collagen, type I, alpha 1, OI4, Collagen alpha-1(I) chain precursor, COL1A1

発現データ

発現マップ on BodyParts3D

相対発現量を、人体 3D 画像にマップしたものです。Genechip 組織40分類 の発現パターンを使用しています。

組織40分類別データ

脳 血 結
EST nodata
GeneChip 大脳:4.04 小脳:3.93 脳幹:3.85 脳梁:4.84 松果体:- 末梢神経:9.44 脊柱:5.80 網膜:- 目:- 動脈:9.95 静脈:10.43 リンパ節:8.58 末梢血:- 脾臓:8.51 胸腺:6.69 骨髄:7.92 脂肪:10.65 骨:- 皮膚:10.22
CAGE 大脳:1.56 小脳:- 脳幹:1.42 脳梁:2.38 松果体:2.44 末梢神経:- 脊柱:1.81 網膜:- 目:- 動脈:6.46 静脈:5.88 リンパ節:4.93 末梢血:- 脾臓:4.62 胸腺:3.96 骨髄:- 脂肪:5.20 骨:- 皮膚:-
RNA-seq 大脳:0.39 小脳:- 脳幹:- 脳梁:- 松果体:- 末梢神経:- 脊柱:- 網膜:- 目:- 動脈:- 静脈:- リンパ節:4.64 末梢血:- 脾臓:- 胸腺:- 骨髄:- 脂肪:4.18 骨:- 皮膚:-
殖 筋 消 肝 肺 腎 泌
EST nodata
GeneChip 子宮:12.21 胎盤:10.61 前立腺:8.33 卵巣:10.98 精巣:7.69 心臓:8.55 骨格筋:5.80 食道:8.90 胃:10.13 腸:10.27 結腸:10.25 肝臓:7.01 肺:8.16 膀胱:- 腎臓:6.46 下垂体:7.45 甲状腺:8.28 副腎:8.03 膵臓:7.77 乳腺:10.94 唾液腺:6.73
CAGE 子宮:7.57 胎盤:6.47 前立腺:5.54 卵巣:6.37 精巣:5.30 心臓:5.14 骨格筋:3.44 食道:4.91 胃:- 腸:4.20 結腸:5.63     肝臓:3.08    肺:5.01 膀胱:6.08 腎臓:3.99 下垂体:2.85 甲状腺:2.87 副腎:- 膵臓:4.34 乳腺:5.48 唾液腺:3.09
RNA-seq 子宮:- 胎盤:- 前立腺:5.04 卵巣:8.02 精巣:5.95 心臓:2.49 骨格筋:0.83 食道:- 胃:- 腸:- 結腸:4.15     肝臓:3.16        肺:4.07    膀胱:- 腎臓:3.79 下垂体:- 甲状腺:3.27 副腎:5.80 膵臓:- 乳腺:7.01 唾液腺:-

詳細情報

IDs

Refseq ID NM_000088
Gene ID 1277
Unigene ID -
Probe set ID 202310_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000108821
GTEx ID ENSG00000108821

オーソログ対応遺伝子

マウス[4]  NM_007742
ラット[3]  NM_053304

染色体

17q21.33  [48,260,650  -  48,278,993]
LRG_1  [5,001  -  22,544]

遺伝子ファミリー (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

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遺伝子オントロジー  (GO ID)

Biological Process

GO:0007596  blood coagulation
GO:0001568  blood vessel development
GO:0060346  bone trabecula formation
GO:0060351  cartilage development involved in endochondral bone morphogenesis
GO:0071230  cellular response to amino acid stimulus
GO:0071260  cellular response to mechanical stimulus
GO:0071300  cellular response to retinoic acid
GO:0032964  collagen biosynthetic process
GO:0030574  collagen catabolic process
GO:0030199  collagen fibril organization
GO:0048706  embryonic skeletal system development
GO:0001958  endochondral ossification
GO:0022617  extracellular matrix disassembly
GO:0030198  extracellular matrix organization
GO:0060325  face morphogenesis
GO:0001957  intramembranous ossification
GO:0050900  leukocyte migration
GO:0010812  negative regulation of cell-substrate adhesion
GO:0001649  osteoblast differentiation
GO:0030168  platelet activation
GO:0030335  positive regulation of cell migration
GO:0010718  positive regulation of epithelial to mesenchymal transition
GO:0045893  positive regulation of transcription, DNA-dependent
GO:0070208  protein heterotrimerization
GO:0034504  protein localization in nucleus
GO:0015031  protein transport
GO:0051591  response to cAMP
GO:0031960  response to corticosteroid stimulus
GO:0042542  response to hydrogen peroxide
GO:0007584  response to nutrient
GO:0043434  response to peptide hormone stimulus
GO:0007605  sensory perception of sound
GO:0001501  skeletal system development
GO:0043589  skin morphogenesis
GO:0034505  tooth mineralization
GO:0007601  visual perception

Cellular Component

GO:0005584  collagen type I
GO:0005788  endoplasmic reticulum lumen
GO:0031012  extracellular matrix
GO:0005576  extracellular region
GO:0005615  extracellular space

Molecular Function

GO:0005201  extracellular matrix structural constituent
GO:0042802  identical protein binding
GO:0046872  metal ion binding
GO:0048407  platelet-derived growth factor binding
GO:0005515  protein binding