NOP56 ribonucleoprotein homolog (yeast)

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Synonym

nucleolar protein 5A (56kD with KKE/D repeat), Nucleolar protein 5A, NOP56, nucleolar protein 5A (56kDa with KKE/D repeat), Nucleolar protein Nop56, NOL5A

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:279.70 cerebellum:768.20 brain stem:- corpus callosum/glia:670.70 pineal gland:- peripheral nerve:92 spine:- retina:118.60 eye:41.10 artery/aorta:389.70 vein:133.30 lymphnode:242.60 peripheral blood:127.50 spleen:605 thymus:579.80 bone marrow:59 adipose:524.30 bone:294.30 skin:216
GeneChip cerebrum:6.89 cerebellum:6.89 brain stem:6.99 corpus callosum/glia:6.68 pineal gland:- peripheral nerve:6.63 spine:6.37 retina:- eye:- artery/aorta:6.61 vein:6.61 lymphnode:6.69 peripheral blood:- spleen:6.65 thymus:6.91 bone marrow:6.58 adipose:6.59 bone:- skin:6.49
CAGE cerebrum:3.34 cerebellum:- brain stem:3.29 corpus callosum/glia:3.18 pineal gland:2.86 peripheral nerve:- spine:3.18 retina:- eye:- artery/aorta:3.21 vein:3.51 lymphnode:3.30 peripheral blood:- spleen:2.95 thymus:3.58 bone marrow:- adipose:3.01 bone:- skin:-
RNA-seq cerebrum:4.47 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.19 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.34 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:391.90 placenta:102 prostate:101.40 ovary:149.10 testis:255.30 heart:178.80 muscle:160.70 esophagus:342.80 stomach:382.40 intestine:1004.30 colon:161.10     liver/hepato:242.80        lung:239.50    bladder:628.10 kidney:176.80 pituitary:- thyroid/parathyroid:163.70 adrenal gland:203.10 pancreas:53.30 breast:334.50 salivary:328.40
GeneChip uterus:6.72 placenta:5.83 prostate:6.55 ovary:6.90 testis:6.46 heart:6.83 muscle:6.93 esophagus:6.89 stomach:6.68 intestine:6.56 colon:6.86 liver/hepato:6.76 lung:6.58 bladder:- kidney:6.69 pituitary:6.87 thyroid/parathyroid:6.54 adrenal gland:6.77 pancreas:6.97 breast:6.50 salivary:6.61
CAGE uterus:3.33 placenta:2.65 prostate:3.24 ovary:3.44 testis:3.08 heart:3.10 muscle:3.55 esophagus:2.89 stomach:- intestine:2.65 colon:2.93     liver/hepato:2.91    lung:2.77 bladder:2.90 kidney:2.69 pituitary:3.43 thyroid/parathyroid:3.01 adrenal gland:- pancreas:3.92 breast:3.66 salivary:3.11
RNA-seq uterus:- placenta:- prostate:4.91 ovary:5.39 testis:5.09 heart:3.08 muscle:4.99 esophagus:- stomach:- intestine:- colon:4.41     liver/hepato:3.82        lung:3.67    bladder:- kidney:4.09 pituitary:- thyroid/parathyroid:5.02 adrenal gland:5.38 pancreas:- breast:4.17 salivary:-

Gene Information

IDs

Refseq ID NM_006392
Gene ID 10528
Unigene ID Hs.376064
Probe set ID 200874_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000101361
GTEx ID ENSG00000101361

Orthologous Gene

Mouse[2]  NM_024193
Rat[1]  NM_001025732

Chromosomal Region

20p13  [2,632,791  -  2,639,039]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

9372940
10737800
11780052
11790298
12417735
12429849
12477932
12777385
14702039
15188402
15489334
15574333
15635413
16196087
16344560
16565220
17081983
17314511
17620599
17636026
17643375
19331828
19454010
19596686
19620283
19928837
19946888
20020773
20085707
20301317
20360068
21139048
21145461
21182205
21683323
21693764
21890473
21906983
21963094
22113938
22178446
22353375
22492559
22505724
22751105
22939629
23000965
23602568
23752268
24457600
24550385
24654937
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0008219  cell death
GO:0006364  rRNA processing

Cellular Component

GO:0031428  box C/D snoRNP complex
GO:0005737  cytoplasm
GO:0005730  nucleolus
GO:0070761  pre-snoRNP complex
GO:0005732  small nucleolar ribonucleoprotein complex

Molecular Function

GO:0005515  protein binding
GO:0003723  RNA binding
GO:0030515  snoRNA binding