YKT6 v-SNARE homolog (S. cerevisiae)

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Synonym

YKT6, YKT6 v-SNARE homolog (S. cerevisiae)

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:94.80 cerebellum:25.20 brain stem:- corpus callosum/glia:145.80 pineal gland:- peripheral nerve:- spine:112.30 retina:- eye:152.80 artery/aorta:179.90 vein:- lymphnode:91 peripheral blood:109.30 spleen:37.80 thymus:128.80 bone marrow:39.40 adipose:- bone:64 skin:76.80
GeneChip cerebrum:4.95 cerebellum:4.39 brain stem:5.22 corpus callosum/glia:4.61 pineal gland:- peripheral nerve:5 spine:4.98 retina:- eye:- artery/aorta:4.67 vein:4.69 lymphnode:4.39 peripheral blood:- spleen:4.10 thymus:4.97 bone marrow:4.55 adipose:4.80 bone:- skin:4.81
CAGE cerebrum:3.70 cerebellum:- brain stem:3.70 corpus callosum/glia:3.75 pineal gland:3.29 peripheral nerve:- spine:3.69 retina:- eye:- artery/aorta:3.65 vein:3.41 lymphnode:3.69 peripheral blood:- spleen:3.32 thymus:3.38 bone marrow:- adipose:3.24 bone:- skin:-
RNA-seq cerebrum:4.42 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.29 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.40 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:91.10 placenta:54.60 prostate:78.90 ovary:37.30 testis:26 heart:127.70 muscle:60.30 esophagus:- stomach:21.20 intestine:129.60 colon:93.30     liver/hepato:21.10        lung:92.90    bladder:125.60 kidney:83.20 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:88.90 breast:102.20 salivary:-
GeneChip uterus:4.58 placenta:4.50 prostate:4.83 ovary:4.42 testis:5.51 heart:4.78 muscle:4.77 esophagus:5.30 stomach:4.43 intestine:4.92 colon:4.97 liver/hepato:4.02 lung:4.27 bladder:- kidney:4.38 pituitary:4.55 thyroid/parathyroid:4.17 adrenal gland:4.44 pancreas:5.03 breast:4.22 salivary:5.05
CAGE uterus:3.18 placenta:3.63 prostate:3.15 ovary:3.14 testis:3.64 heart:3.36 muscle:3.34 esophagus:3.53 stomach:- intestine:3.51 colon:3.55     liver/hepato:3.18    lung:3.17 bladder:3.17 kidney:3.63 pituitary:3.45 thyroid/parathyroid:3.44 adrenal gland:- pancreas:4.29 breast:3.71 salivary:3.92
RNA-seq uterus:- placenta:- prostate:4.04 ovary:4.52 testis:4.64 heart:3.64 muscle:3.42 esophagus:- stomach:- intestine:- colon:4.00     liver/hepato:3.21        lung:3.64    bladder:- kidney:4.59 pituitary:- thyroid/parathyroid:4.88 adrenal gland:4.77 pancreas:- breast:4.63 salivary:-

Gene Information

IDs

Refseq ID NM_006555
Gene ID 10652
Unigene ID Hs.520794
Probe set ID 217785_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000106636
GTEx ID ENSG00000106636

Orthologous Gene

Mouse[2]  NM_019661
Rat [0]  

Chromosomal Region

7p13  [44,240,567  -  44,253,893]

Gene Family (Interpro ID)

IPR010908  Longin
IPR011012  Longin-like

Link to Pubmed  (Pubmed ID)

8125298
9211930
11474112
11884350
11927603
12388752
12477932
12690205
14607937
14702039
15044687
15215310
15479160
15489334
15544955
16344560
16354670
16821082
17643375
18029348
21139048
21890473
21906983
22412018
22939629
23000965
23824909
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0006888  ER to Golgi vesicle-mediated transport
GO:0015031  protein transport
GO:0042147  retrograde transport, endosome to Golgi
GO:0006904  vesicle docking during exocytosis
GO:0006903  vesicle targeting

Cellular Component

GO:0005737  cytoplasm
GO:0030659  cytoplasmic vesicle membrane
GO:0005829  cytosol
GO:0005783  endoplasmic reticulum
GO:0005768  endosome
GO:0005794  Golgi apparatus
GO:0000139  Golgi membrane
GO:0005887  integral to plasma membrane
GO:0005739  mitochondrion
GO:0031201  SNARE complex

Molecular Function

GO:0019706  protein-cysteine S-palmitoleyltransferase activity
GO:0005484  SNAP receptor activity