adaptor-related protein complex 1, sigma 1 subunit

Synonym

Clathrin coat assembly protein AP19, AP-1 complex subunit sigma-1A, Adapter-related protein complex 1 sigma-1A subunit, SIGMA1A, AP1S1, Golgi adaptor HA1/AP1 adaptin sigma-1A subunit, AP19, Sigma-adaptin 1A, Adaptor protein complex AP-1 sigma-1A subunit, Sigma 1a subunit of AP-1 clathrin, HA1 19 kDa subunit, adaptor-related protein complex 1, sigma 1 subunit, CLAPS1

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:2.40

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:10.10

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

GeneChip

cerebrum:7.30

cerebellum:6.66

brain stem:6.97

corpus callosum/glia:6.66

pineal gland:-

peripheral nerve:7.12

spine:6.71

retina:-

eye:-

artery/aorta:6.34

vein:6.57

lymphnode:6.39

peripheral blood:-

spleen:6.35

thymus:6.30

bone marrow:6.65

adipose:6.42

bone:-

skin:6.45

CAGE

cerebrum:3.52

cerebellum:-

brain stem:2.70

corpus callosum/glia:2.56

pineal gland:2.11

peripheral nerve:-

spine:2.30

retina:-

eye:-

artery/aorta:1.85

vein:2.09

lymphnode:2.32

peripheral blood:-

spleen:2.25

thymus:2.15

bone marrow:-

adipose:2.67

bone:-

skin:-

RNA-seq

cerebrum:5.01

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:3.68

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:3.41

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:9.10

placenta:-

prostate:-

ovary:-

testis:4.30

heart:-

muscle:-

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:-

lung:4.90

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

GeneChip

uterus:6.45

placenta:6.42

prostate:6.50

ovary:6.52

testis:6.35

heart:6.44

muscle:6.18

esophagus:6.45

stomach:6.63

intestine:6.90

colon:7.18

liver/hepato:6.58

lung:6.57

bladder:-

kidney:6.89

pituitary:6.78

thyroid/parathyroid:6.20

adrenal gland:6.64

pancreas:6.82

breast:6.41

salivary:6.67

CAGE

uterus:2.35

placenta:2.92

prostate:2.65

ovary:2.20

testis:2.56

heart:1.94

muscle:1.42

esophagus:3.00

stomach:-

intestine:3.05

colon:2.99

liver/hepato:2.83

lung:2.39

bladder:2.39

kidney:3.24

pituitary:2.56

thyroid/parathyroid:2.84

adrenal gland:-

pancreas:2.66

breast:1.68

salivary:3.05

RNA-seq

uterus:-

placenta:-

prostate:4.14

ovary:3.70

testis:4.00

heart:2.13

muscle:1.82

esophagus:-

stomach:-

intestine:-

colon:3.53

liver/hepato:3.42

lung:3.37

bladder:-

kidney:4.62

pituitary:-

thyroid/parathyroid:3.74

adrenal gland:3.44

pancreas:-

breast:3.58

salivary:-

IDs

Refseq ID	NM_001283
Gene ID	1174
Unigene ID	Hs.489365
Probe set ID	209635_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000106367
GTEx ID	ENSG00000106367

Orthologous Gene

Mouse[1]	NM_007457
Rat[2]	NM_001108331

Chromosomal Region

7q22.1 [100,797,678 - 100,804,877]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR016635	Adaptor protein complex, sigma subunit
IPR000804	Clathrin adaptor, sigma subunit/coatomer, zeta subunit

GO:0019886	antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0006886	intracellular protein transport
GO:0016044	membrane organization
GO:0006892	post-Golgi vesicle-mediated transport
GO:0006898	receptor-mediated endocytosis
GO:0050690	regulation of defense response to virus by virus
GO:0009615	response to virus
GO:0016032	viral reproduction

GO:0030121	AP-1 adaptor complex
GO:0030130	clathrin coat of trans-Golgi network vesicle
GO:0005905	coated pit
GO:0030659	cytoplasmic vesicle membrane
GO:0005829	cytosol
GO:0000139	Golgi membrane
GO:0005765	lysosomal membrane
GO:0032588	trans-Golgi network membrane

adaptor-related protein complex 1, sigma 1 subunit

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function