pseudouridylate synthase-like 1

 jump to detail

Synonym

tRNA-uridine isomerase-like 1, PUSL1, FLJ90811, tRNA pseudouridylate synthase-like 1, tRNA pseudouridine synthase-like 1, pseudouridylate synthase-like 1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:2.40 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:5.90 artery/aorta:- vein:- lymphnode:10.10 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:14.40
GeneChip nodata
CAGE cerebrum:1.76 cerebellum:- brain stem:2.05 corpus callosum/glia:2.11 pineal gland:1.74 peripheral nerve:- spine:1.72 retina:- eye:- artery/aorta:2.08 vein:2.11 lymphnode:2.07 peripheral blood:- spleen:1.88 thymus:1.85 bone marrow:- adipose:1.54 bone:- skin:-
RNA-seq cerebrum:0.95 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.82 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.48 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:21.90 prostate:- ovary:37.30 testis:- heart:12.80 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:10.60        lung:14.70    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE uterus:2.38 placenta:1.90 prostate:2.40 ovary:2.19 testis:1.86 heart:1.65 muscle:0.59 esophagus:2.41 stomach:- intestine:1.86 colon:2.06     liver/hepato:2.41    lung:1.81 bladder:2.24 kidney:2.05 pituitary:2.25 thyroid/parathyroid:2.12 adrenal gland:- pancreas:2.66 breast:2.11 salivary:2.60
RNA-seq uterus:- placenta:- prostate:2.06 ovary:2.07 testis:2.07 heart:1.23 muscle:1.57 esophagus:- stomach:- intestine:- colon:1.26     liver/hepato:1.68        lung:2.05    bladder:- kidney:1.73 pituitary:- thyroid/parathyroid:1.29 adrenal gland:1.39 pancreas:- breast:1.39 salivary:-

Gene Information

IDs

Refseq ID NM_153339
Gene ID 126789
Unigene ID Hs.400659
Probe set ID -
Ensembl ID ENSG00000169972
GTEx ID ENSG00000169972

Orthologous Gene

Mouse[1]  NM_001033490
Rat[1]  NM_001108699

Chromosomal Region

1p36.33  [1,243,947  -  1,247,057]

Gene Family (Interpro ID)

IPR001406  Pseudouridine synthase I, TruA
IPR020103  Pseudouridine synthase, catalytic domain

Link to Pubmed  (Pubmed ID)

12477932
14702039
15489334
16303743
17207965
20186120
21832049
21906983
23128233
24250222

Gene Ontology  (GO ID)

Biological Process

GO:0001522  pseudouridine synthesis
GO:0008033  tRNA processing

Molecular Function

GO:0009982  pseudouridine synthase activity
GO:0003723  RNA binding