patched domain containing 1

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Synonym

MGC149798, FLJ30296, patched domain containing 1, PTCHD1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:3.60 cerebellum:25.20 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:4.80
GeneChip nodata
CAGE cerebrum:2.46 cerebellum:- brain stem:2.28 corpus callosum/glia:1.36 pineal gland:0.47 peripheral nerve:- spine:2.15 retina:- eye:- artery/aorta:1.33 vein:0.34 lymphnode:0.03 peripheral blood:- spleen:0.51 thymus:0.37 bone marrow:- adipose:0.26 bone:- skin:-
RNA-seq cerebrum:1.54 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.45 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.24 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:32.40 colon:8.50     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:9.30 salivary:-
GeneChip nodata
CAGE uterus:2.51 placenta:0 prostate:2.23 ovary:0.76 testis:1.15 heart:0.38 muscle:0.30 esophagus:1.46 stomach:- intestine:0.90 colon:2.07     liver/hepato:0    lung:0.83 bladder:2.39 kidney:0.08 pituitary:1.17 thyroid/parathyroid:0.28 adrenal gland:- pancreas:0 breast:0.55 salivary:0.62
RNA-seq uterus:- placenta:- prostate:2.35 ovary:0.05 testis:0.94 heart:0.10 muscle:0.09 esophagus:- stomach:- intestine:- colon:1.38     liver/hepato:0        lung:0.19    bladder:- kidney:0.17 pituitary:- thyroid/parathyroid:0.07 adrenal gland:0.63 pancreas:- breast:0.31 salivary:-

Gene Information

IDs

Refseq ID NM_173495
Gene ID 139411
Unigene ID Hs.319503
Probe set ID -
Ensembl ID ENSG00000165186
GTEx ID ENSG00000165186

Orthologous Gene

Mouse[1]  NM_001093750
Rat [0]  

Chromosomal Region

Xp22.11  [23,352,133  -  23,422,489]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932
14702039
20301615
20531469
20844286
21091464
22610502
24722188

Gene Ontology  (GO ID)

Biological Process

GO:0050890  cognition
GO:0007224  smoothened signaling pathway

Cellular Component

GO:0016021  integral to membrane
GO:0005886  plasma membrane

Molecular Function

GO:0008158  hedgehog receptor activity
GO:0003674  molecular_function