AT rich interactive domain 2 (ARID, RFX-like)

Synonym

DKFZp686G052, AT-rich interactive domain-containing protein 2, DKFZp779P0222, ARID domain-containing protein 2, p200, AT rich interactive domain 2 (ARID, RFX-like), BAF200, BRG1-associated factor 200, KIAA1557, ARID2, FLJ30619

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:29.60

cerebellum:12.60

brain stem:-

corpus callosum/glia:29.20

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:47

artery/aorta:30

vein:-

lymphnode:30.30

peripheral blood:-

spleen:-

thymus:64.40

bone marrow:59

adipose:-

bone:-

skin:62.40

GeneChip

nodata

CAGE

cerebrum:2.43

cerebellum:-

brain stem:2.62

corpus callosum/glia:2.51

pineal gland:2.64

peripheral nerve:-

spine:2.71

retina:-

eye:-

artery/aorta:2.86

vein:2.86

lymphnode:2.90

peripheral blood:-

spleen:2.70

thymus:3.66

bone marrow:-

adipose:2.68

bone:-

skin:-

RNA-seq

cerebrum:1.79

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:2.33

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:2.19

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:9.10

placenta:47.40

prostate:169

ovary:149.10

testis:125.50

heart:25.50

muscle:20.10

esophagus:-

stomach:42.50

intestine:32.40

colon:161.10

liver/hepato:31.70

lung:29.30

bladder:-

kidney:62.40

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:148.70

salivary:-

GeneChip

nodata

CAGE

uterus:2.90

placenta:2.67

prostate:2.62

ovary:2.60

testis:3.67

heart:2.59

muscle:2.27

esophagus:2.63

stomach:-

intestine:2.93

colon:2.84

liver/hepato:2.01

lung:2.91

bladder:2.73

kidney:2.53

pituitary:2.85

thyroid/parathyroid:2.49

adrenal gland:-

pancreas:2.08

breast:2.95

salivary:2.35

RNA-seq

uterus:-

placenta:-

prostate:2.34

ovary:2.58

testis:3.48

heart:1.64

muscle:1.45

esophagus:-

stomach:-

intestine:-

colon:1.97

liver/hepato:1.20

lung:2.13

bladder:-

kidney:2.15

pituitary:-

thyroid/parathyroid:2.37

adrenal gland:2.03

pancreas:-

breast:2.15

salivary:-

IDs

Refseq ID	NM_152641
Gene ID	196528
Unigene ID	Hs.317304
Probe set ID	-
Ensembl ID	ENSG00000189079
GTEx ID	ENSG00000189079

Orthologous Gene

Mouse[1]	NM_175251
Rat[1]	NM_175251

Chromosomal Region

12q12 [46,123,448 - 46,301,823]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0016568	chromatin modification
GO:0006337	nucleosome disassembly
GO:0006355	regulation of transcription, DNA-dependent
GO:0006351	transcription, DNA-dependent

Cellular Component

GO:0005634

nucleus

Molecular Function

GO:0003677	DNA binding
GO:0046872	metal ion binding
GO:0005515	protein binding

AT rich interactive domain 2 (ARID, RFX-like)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function