spermatogenesis associated 13

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Synonym

SPATA13, FLJ31208, MGC129989, MGC129988, spermatogenesis associated 13, RP11-307N16.3, FLJ35435

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip nodata
CAGE cerebrum:3.67 cerebellum:- brain stem:4.23 corpus callosum/glia:4.59 pineal gland:3.06 peripheral nerve:- spine:4.25 retina:- eye:- artery/aorta:3.03 vein:3.39 lymphnode:3.57 peripheral blood:- spleen:4.43 thymus:3.45 bone marrow:- adipose:2.72 bone:- skin:-
RNA-seq cerebrum:3.20 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.28 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.31 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip nodata
CAGE uterus:2.84 placenta:3.67 prostate:3.11 ovary:3.27 testis:2.60 heart:2.96 muscle:1.61 esophagus:1.98 stomach:- intestine:3.58 colon:3.50     liver/hepato:3.73    lung:3.74 bladder:2.61 kidney:3.22 pituitary:2.46 thyroid/parathyroid:3.21 adrenal gland:- pancreas:3.87 breast:2.87 salivary:2.63
RNA-seq uterus:- placenta:- prostate:2.16 ovary:2.87 testis:1.85 heart:1.15 muscle:0.34 esophagus:- stomach:- intestine:- colon:2.18     liver/hepato:2.39        lung:3.61    bladder:- kidney:3.11 pituitary:- thyroid/parathyroid:2.35 adrenal gland:2.64 pancreas:- breast:1.94 salivary:-

Gene Information

IDs

Refseq ID NM_153023
Gene ID 221178
Unigene ID -
Probe set ID -
Ensembl ID ENSG00000182957
GTEx ID ENSG00000182957

Orthologous Gene

Mouse[1]  NM_001033272
Rat [0]  

Chromosomal Region

13q12.12  [24,734,861  -  24,896,096]

Gene Family (Interpro ID)

IPR001849  Pleckstrin homology

Link to Pubmed  (Pubmed ID)

12477932
14702039
15057823
15342556
15489334
16344560
17145773
17599059
18029348
18821565
19151759
19910543
19934221
22064162
22419666
22745667
22837378
24623842

Gene Ontology  (GO ID)

Biological Process

GO:0016477  cell migration
GO:0046847  filopodium assembly
GO:0030032  lamellipodium assembly
GO:0030334  regulation of cell migration
GO:0035023  regulation of Rho protein signal transduction

Cellular Component

GO:0005737  cytoplasm
GO:0030175  filopodium
GO:0030027  lamellipodium
GO:0005730  nucleolus
GO:0005634  nucleus
GO:0032587  ruffle membrane

Molecular Function

GO:0005085  guanyl-nucleotide exchange factor activity
GO:0005543  phospholipid binding
GO:0005515  protein binding
GO:0030676  Rac guanyl-nucleotide exchange factor activity