RAD54 homolog B (S. cerevisiae)

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Synonym

RAD54 homolog B (S. cerevisiae), FSBP, RAD54B, DNA repair and recombination protein RAD54B, RAD54 homolog B

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:14.20 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:92 spine:- retina:- eye:23.50 artery/aorta:- vein:- lymphnode:20.20 peripheral blood:- spleen:- thymus:38.70 bone marrow:39.40 adipose:- bone:12.80 skin:19.20
GeneChip cerebrum:4.28 cerebellum:4.20 brain stem:4.10 corpus callosum/glia:4.27 pineal gland:- peripheral nerve:4.74 spine:4.12 retina:- eye:- artery/aorta:3.73 vein:3.85 lymphnode:4.25 peripheral blood:- spleen:3.86 thymus:5.45 bone marrow:4.40 adipose:4.08 bone:- skin:4
CAGE cerebrum:2.40 cerebellum:- brain stem:2.43 corpus callosum/glia:2.17 pineal gland:4.48 peripheral nerve:- spine:2.54 retina:- eye:- artery/aorta:1.75 vein:1.76 lymphnode:1.89 peripheral blood:- spleen:1.65 thymus:2.76 bone marrow:- adipose:1.79 bone:- skin:-
RNA-seq cerebrum:0.41 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.00 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.11 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:18.20 placenta:18.20 prostate:22.50 ovary:37.30 testis:13 heart:- muscle:- esophagus:- stomach:106.20 intestine:- colon:50.90     liver/hepato:21.10        lung:4.90    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:18.60 salivary:-
GeneChip uterus:4.53 placenta:4.03 prostate:4.14 ovary:5.12 testis:4.53 heart:4.18 muscle:4 esophagus:4.12 stomach:4.24 intestine:4.16 colon:4.18 liver/hepato:4.35 lung:3.99 bladder:- kidney:4.17 pituitary:4.49 thyroid/parathyroid:4.08 adrenal gland:4.30 pancreas:4.16 breast:4.25 salivary:4.05
CAGE uterus:2.08 placenta:1.61 prostate:2.49 ovary:1.99 testis:2.65 heart:2.15 muscle:1.81 esophagus:2.16 stomach:- intestine:1.48 colon:1.81     liver/hepato:1.33    lung:1.86 bladder:2.21 kidney:2.28 pituitary:3.49 thyroid/parathyroid:1.49 adrenal gland:- pancreas:0.94 breast:1.68 salivary:1.39
RNA-seq uterus:- placenta:- prostate:0.85 ovary:0.14 testis:1.50 heart:0.18 muscle:0 esophagus:- stomach:- intestine:- colon:0.17     liver/hepato:0.00        lung:0.00    bladder:- kidney:0.00 pituitary:- thyroid/parathyroid:0.35 adrenal gland:0.00 pancreas:- breast:0.70 salivary:-

Gene Information

IDs

Refseq ID NM_012415
Gene ID 25788
Unigene ID Hs.30561
Probe set ID 219494_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000197275
GTEx ID ENSG00000197275

Orthologous Gene

Mouse[1]  NM_001039556
Rat [0]  

Chromosomal Region

8q22.1  [95,384,188  -  95,487,337]

Gene Family (Interpro ID)

IPR014001  DEAD-like helicase, N-terminal
IPR014021  Helicase, superfamily 1/2, ATP-binding domain

Link to Pubmed  (Pubmed ID)

10362364
10737800
10851248
11181995
11782437
11884632
12477932
15146197
15164066
15489334
16189514
16344560
16428451
16945962
17118963
17353931
17405295
17417655
17567985
17585536
18029348
18463164
18718930
19012493
19060904
19124506
19218431
19471022
19536092
19690177
20522537
20610542
20687897
21145461
21890473
21906983
23876972
24002644
24163370
24250222

Gene Ontology  (GO ID)

Biological Process

GO:0032508  DNA duplex unwinding
GO:0000724  double-strand break repair via homologous recombination
GO:0006312  mitotic recombination
GO:0007131  reciprocal meiotic recombination

Cellular Component

GO:0005634  nucleus

Molecular Function

GO:0005524  ATP binding
GO:0003677  DNA binding
GO:0003678  DNA helicase activity
GO:0015616  DNA translocase activity
GO:0003724  RNA helicase activity