gem (nuclear organelle) associated protein 5

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Synonym

Gem-associated protein 5, DKFZP586M1824, MGC142174, gem (nuclear organelle) associated protein 5, Gemin5, GEMIN5

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:46.20 cerebellum:25.20 brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:- spine:- retina:- eye:23.50 artery/aorta:- vein:- lymphnode:50.60 peripheral blood:36.40 spleen:18.90 thymus:38.70 bone marrow:- adipose:40.30 bone:12.80 skin:19.20
GeneChip nodata
CAGE cerebrum:2.89 cerebellum:- brain stem:2.94 corpus callosum/glia:3.28 pineal gland:3.05 peripheral nerve:- spine:2.98 retina:- eye:- artery/aorta:2.72 vein:3.02 lymphnode:3.09 peripheral blood:- spleen:2.87 thymus:3.25 bone marrow:- adipose:3.35 bone:- skin:-
RNA-seq cerebrum:0.79 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.19 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.41 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:45.60 placenta:- prostate:45.10 ovary:74.50 testis:47.60 heart:12.80 muscle:20.10 esophagus:- stomach:21.20 intestine:- colon:25.40     liver/hepato:21.10        lung:9.80    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:44.50 breast:9.30 salivary:-
GeneChip nodata
CAGE uterus:3.20 placenta:2.54 prostate:3.02 ovary:3.28 testis:3.15 heart:3.30 muscle:3.27 esophagus:2.73 stomach:- intestine:2.29 colon:2.92     liver/hepato:2.84    lung:2.69 bladder:3.03 kidney:2.51 pituitary:3.01 thyroid/parathyroid:2.91 adrenal gland:- pancreas:3.06 breast:2.91 salivary:2.53
RNA-seq uterus:- placenta:- prostate:1.45 ovary:2.80 testis:2.52 heart:2.00 muscle:2.32 esophagus:- stomach:- intestine:- colon:0.98     liver/hepato:0.09        lung:0.15    bladder:- kidney:1.02 pituitary:- thyroid/parathyroid:2.21 adrenal gland:2.01 pancreas:- breast:2.33 salivary:-

Gene Information

IDs

Refseq ID NM_015465
Gene ID 25929
Unigene ID Hs.483921
Probe set ID -
Ensembl ID ENSG00000082516
GTEx ID ENSG00000082516

Orthologous Gene

Mouse[4]  NM_001166669, NM_001166670, NM_001166671, NM_172558
Rat[4]  NM_001166669, NM_001166670, NM_001166671, NM_172558

Chromosomal Region

5q33.2  [154,266,976  -  154,317,769]

Gene Family (Interpro ID)

IPR020472  G-protein beta WD-40 repeat, region
IPR001680  WD40 repeat
IPR019782  WD40 repeat 2
IPR019781  WD40 repeat, subgroup
IPR011046  WD40 repeat-like-containing domain
IPR017986  WD40-repeat-containing domain
IPR015943  WD40/YVTN repeat-like-containing domain

Link to Pubmed  (Pubmed ID)

10531003
11714716
11914277
12065586
12477932
14702039
15130578
15302935
15489334
16230076
16344560
16739988
16857593
16964243
17081983
17381311
17541429
17640370
17640873
18029348
18245461
18781797
18984161
19377484
19750007
19946888
20085707
20513430
21139048
21145461
21906983
21963094
22268729
22586326
22863883
22939629
22990118
23000965
23182705
23221635
23246001
24332808
24457600
24550385
24598255
24639526
24654937

Gene Ontology  (GO ID)

Biological Process

GO:0010467  gene expression
GO:0034660  ncRNA metabolic process
GO:0000398  nuclear mRNA splicing, via spliceosome
GO:0006461  protein complex assembly
GO:0016070  RNA metabolic process
GO:0000387  spliceosomal snRNP assembly

Cellular Component

GO:0015030  Cajal body
GO:0005737  cytoplasm
GO:0005829  cytosol
GO:0016604  nuclear body
GO:0005654  nucleoplasm
GO:0005634  nucleus
GO:0005681  spliceosomal complex

Molecular Function

GO:0005515  protein binding
GO:0017069  snRNA binding