RNA pseudouridylate synthase domain containing 2

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Synonym

RNA pseudouridylate synthase domain containing 2, FLJ31409, chromosome 15 open reading frame 19, RPUSD2, C15orf19, C18B11

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:19 cerebellum:25.20 brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:- spine:- retina:- eye:41.10 artery/aorta:60 vein:- lymphnode:40.40 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:38.40 skin:4.80
GeneChip cerebrum:4.76 cerebellum:4.71 brain stem:4.68 corpus callosum/glia:4.58 pineal gland:- peripheral nerve:4.47 spine:4.46 retina:- eye:- artery/aorta:4.54 vein:4.61 lymphnode:4.57 peripheral blood:- spleen:4.56 thymus:4.55 bone marrow:4.68 adipose:4.68 bone:- skin:4.85
CAGE cerebrum:1.69 cerebellum:- brain stem:1.55 corpus callosum/glia:1.62 pineal gland:1.43 peripheral nerve:- spine:1.07 retina:- eye:- artery/aorta:1.38 vein:1.80 lymphnode:1.46 peripheral blood:- spleen:1.82 thymus:1.91 bone marrow:- adipose:1.47 bone:- skin:-
RNA-seq cerebrum:1.48 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.45 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.07 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:40.10 prostate:- ovary:- testis:26 heart:38.30 muscle:- esophagus:- stomach:- intestine:- colon:25.40     liver/hepato:-        lung:14.70    bladder:- kidney:31.20 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:8.90 breast:9.30 salivary:-
GeneChip uterus:4.62 placenta:4.71 prostate:4.43 ovary:4.84 testis:4.69 heart:4.58 muscle:4.82 esophagus:4.78 stomach:4.48 intestine:4.70 colon:4.79 liver/hepato:4.89 lung:4.33 bladder:- kidney:4.55 pituitary:4.61 thyroid/parathyroid:4.42 adrenal gland:4.53 pancreas:4.44 breast:4.88 salivary:4.74
CAGE uterus:1.73 placenta:1.50 prostate:1.74 ovary:1.53 testis:1.61 heart:1.50 muscle:1.94 esophagus:1.80 stomach:- intestine:1.39 colon:1.54     liver/hepato:1.63    lung:1.65 bladder:1.47 kidney:1.44 pituitary:1.59 thyroid/parathyroid:1.81 adrenal gland:- pancreas:1.74 breast:1.80 salivary:1.67
RNA-seq uterus:- placenta:- prostate:1.67 ovary:2.12 testis:2.03 heart:1.47 muscle:2.03 esophagus:- stomach:- intestine:- colon:1.15     liver/hepato:1.97        lung:0.96    bladder:- kidney:1.93 pituitary:- thyroid/parathyroid:2.16 adrenal gland:2.45 pancreas:- breast:1.69 salivary:-

Gene Information

IDs

Refseq ID NM_152260
Gene ID 27079
Unigene ID Hs.173311
Probe set ID 221940_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000166133
GTEx ID ENSG00000166133

Orthologous Gene

Mouse[1]  NM_173450
Rat[1]  NM_001135845

Chromosomal Region

15q15.1  [40,861,499  -  40,866,905]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932
14702039
16344560
17474147
21832049
22863883
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0001522  pseudouridine synthesis

Cellular Component

GO:0005575  cellular_component

Molecular Function

GO:0003674  molecular_function
GO:0009982  pseudouridine synthase activity
GO:0003723  RNA binding