basic helix-loop-helix family, member e22

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Synonym

trinucleotide repeat containing 20, CAGL85, Beta3, BHLHB5, TNRC20

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:7.10 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:37.80 thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip nodata
CAGE cerebrum:1.84 cerebellum:- brain stem:0.48 corpus callosum/glia:0.99 pineal gland:0.26 peripheral nerve:- spine:0.62 retina:- eye:- artery/aorta:0.79 vein:1.34 lymphnode:1.06 peripheral blood:- spleen:0.56 thymus:0.12 bone marrow:- adipose:0.26 bone:- skin:-
RNA-seq cerebrum:3.14 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.36 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.52 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE uterus:0.78 placenta:0.16 prostate:0.53 ovary:0.14 testis:0.61 heart:0.08 muscle:0.25 esophagus:0.73 stomach:- intestine:0.33 colon:0.46     liver/hepato:0.26    lung:0.92 bladder:0.83 kidney:0.08 pituitary:0.62 thyroid/parathyroid:0.28 adrenal gland:- pancreas:0 breast:0.90 salivary:0.36
RNA-seq uterus:- placenta:- prostate:0.93 ovary:0.19 testis:0.41 heart:0.10 muscle:0 esophagus:- stomach:- intestine:- colon:1.10     liver/hepato:0.23        lung:1.61    bladder:- kidney:0.18 pituitary:- thyroid/parathyroid:0.21 adrenal gland:1.24 pancreas:- breast:0.35 salivary:-

Gene Information

IDs

Refseq ID NM_152414
Gene ID 27319
Unigene ID Hs.388788
Probe set ID -
Ensembl ID ENSG00000180828
GTEx ID ENSG00000180828

Orthologous Gene

Mouse[1]  NM_021560
Rat[1]  NM_001108940

Chromosomal Region

8q12.3  [65,492,814  -  65,496,181]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

9225980
12213201
12477932
12617822
14516699
14702039
18557763

Gene Ontology  (GO ID)

Biological Process

GO:0021960  anterior commissure morphogenesis
GO:0021540  corpus callosum morphogenesis
GO:0021957  corticospinal tract morphogenesis
GO:0045892  negative regulation of transcription, DNA-dependent
GO:0060040  retinal bipolar neuron differentiation

Cellular Component

GO:0005634  nucleus

Molecular Function

GO:0003682  chromatin binding
GO:0042803  protein homodimerization activity