procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2

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Synonym

Lysyl hydroxylase 2, procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2, PLOD2, LH2, TLH

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:26.10

cerebellum:12.60

brain stem:-

corpus callosum/glia:29.20

pineal gland:-

peripheral nerve:92

spine:-

retina:-

eye:29.40

artery/aorta:209.80

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:64.40

bone marrow:98.40

adipose:40.30

bone:89.60

skin:144

GeneChip

cerebrum:5.18

cerebellum:4.66

brain stem:5.14

corpus callosum/glia:5.90

pineal gland:-

peripheral nerve:5.31

spine:6.66

retina:-

eye:-

artery/aorta:7.79

vein:7.73

lymphnode:4.60

peripheral blood:-

spleen:4.46

thymus:5.94

bone marrow:3.71

adipose:7.63

bone:-

skin:6

CAGE

cerebrum:3.30

cerebellum:-

brain stem:3.46

corpus callosum/glia:2.95

pineal gland:3.24

peripheral nerve:-

spine:4.32

retina:-

eye:-

artery/aorta:5.00

vein:3.36

lymphnode:2.41

peripheral blood:-

spleen:2.32

thymus:3.15

bone marrow:-

adipose:4.98

bone:-

skin:-

RNA-seq

cerebrum:2.96

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:2.66

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:5.44

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:136.70

placenta:87.40

prostate:33.80

ovary:111.80

testis:17.30

heart:12.80

muscle:-

esophagus:-

stomach:-

intestine:32.40

colon:25.40

liver/hepato:84.40

lung:44

bladder:-

kidney:62.40

pituitary:116

thyroid/parathyroid:163.70

adrenal gland:101.60

pancreas:106.70

breast:46.50

salivary:-

GeneChip

uterus:7.06

placenta:7.45

prostate:6.70

ovary:7.30

testis:5.33

heart:6.69

muscle:4.06

esophagus:5.40

stomach:6.49

intestine:6.41

colon:5.24

liver/hepato:7.55

lung:5.55

bladder:-

kidney:6.42

pituitary:5.39

thyroid/parathyroid:8.54

adrenal gland:6.73

pancreas:6.04

breast:6.15

salivary:5.36

CAGE

uterus:3.65

placenta:4.42

prostate:3.77

ovary:4.18

testis:3.00

heart:4.25

muscle:2.72

esophagus:3.73

stomach:-

intestine:4.55

colon:4.32

liver/hepato:5.51

lung:3.47

bladder:4.45

kidney:4.03

pituitary:2.93

thyroid/parathyroid:4.75

adrenal gland:-

pancreas:3.77

breast:4.88

salivary:2.66

RNA-seq

uterus:-

placenta:-

prostate:4.53

ovary:4.32

testis:2.82

heart:1.61

muscle:0.00

esophagus:-

stomach:-

intestine:-

colon:4.24

liver/hepato:3.26

lung:4.11

bladder:-

kidney:2.89

pituitary:-

thyroid/parathyroid:3.88

adrenal gland:2.61

pancreas:-

breast:6.22

salivary:-

IDs

Refseq ID	NM_182943
Gene ID	5352
Unigene ID	Hs.477866
Probe set ID	202620_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000152952
GTEx ID	ENSG00000152952

Orthologous Gene

Mouse[4]	NM_001142916, NM_011961
Rat[2]	NM_001142915, NM_175869

Chromosomal Region

3q24 [145,787,227 - 145,881,440]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR005123	Oxoglutarate/iron-dependent oxygenase
IPR006620	Prolyl 4-hydroxylase, alpha subunit

GO:0030198	extracellular matrix organization
GO:0006464	protein modification process
GO:0001666	response to hypoxia

GO:0005783	endoplasmic reticulum
GO:0005789	endoplasmic reticulum membrane
GO:0030867	rough endoplasmic reticulum membrane

GO:0005506	iron ion binding
GO:0031418	L-ascorbic acid binding
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0008475	procollagen-lysine 5-dioxygenase activity

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function