plexin B1

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Synonym

KIAA0407, plexin B1, Semaphorin receptor SEP, Plexin-B1 precursor, PLXN5, PLEXIN-B1, PLXNB1, SEP

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:103.10

cerebellum:100.80

brain stem:-

corpus callosum/glia:58.30

pineal gland:-

peripheral nerve:30.70

spine:112.30

retina:-

eye:70.50

artery/aorta:30

vein:-

lymphnode:20.20

peripheral blood:-

spleen:-

thymus:38.70

bone marrow:-

adipose:-

bone:102.40

skin:96

GeneChip

cerebrum:5.70

cerebellum:5.89

brain stem:5.74

corpus callosum/glia:5.99

pineal gland:-

peripheral nerve:5.39

spine:5.70

retina:-

eye:-

artery/aorta:5.73

vein:5.93

lymphnode:5.45

peripheral blood:-

spleen:5.34

thymus:5.53

bone marrow:5.82

adipose:5.62

bone:-

skin:5.56

CAGE

cerebrum:3.74

cerebellum:-

brain stem:4.23

corpus callosum/glia:4.73

pineal gland:1.85

peripheral nerve:-

spine:4.14

retina:-

eye:-

artery/aorta:3.19

vein:1.44

lymphnode:1.22

peripheral blood:-

spleen:1.41

thymus:1.38

bone marrow:-

adipose:1.76

bone:-

skin:-

RNA-seq

cerebrum:0.82

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:0.00

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:0.39

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:54.70

placenta:47.40

prostate:371.70

ovary:111.80

testis:17.30

heart:12.80

muscle:-

esophagus:-

stomach:21.20

intestine:32.40

colon:135.70

liver/hepato:21.10

lung:102.60

bladder:-

kidney:52

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:80

breast:102.20

salivary:328.40

GeneChip

uterus:5.56

placenta:5.33

prostate:5.46

ovary:5.74

testis:5.39

heart:5.75

muscle:5.84

esophagus:5.70

stomach:5.33

intestine:5.69

colon:5.74

liver/hepato:5.76

lung:5.57

bladder:-

kidney:5.71

pituitary:5.60

thyroid/parathyroid:5.53

adrenal gland:5.53

pancreas:5.95

breast:5.39

salivary:5.65

CAGE

uterus:2.49

placenta:1.98

prostate:2.45

ovary:2.26

testis:1.78

heart:2.12

muscle:0.66

esophagus:3.03

stomach:-

intestine:2.31

colon:2.67

liver/hepato:3.01

lung:2.33

bladder:2.13

kidney:2.85

pituitary:2.41

thyroid/parathyroid:3.17

adrenal gland:-

pancreas:2.86

breast:2.79

salivary:2.01

RNA-seq

uterus:-

placenta:-

prostate:0.51

ovary:0.31

testis:0.00

heart:0.61

muscle:0.00

esophagus:-

stomach:-

intestine:-

colon:0.06

liver/hepato:0.23

lung:0.77

bladder:-

kidney:1.22

pituitary:-

thyroid/parathyroid:0.33

adrenal gland:0.17

pancreas:-

breast:0.34

salivary:-

IDs

Refseq ID	NM_002673
Gene ID	5364
Unigene ID	Hs.476209
Probe set ID	215668_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000164050
GTEx ID	ENSG00000164050

Orthologous Gene

Mouse[1]	NM_172775
Rat[1]	NM_172775

Chromosomal Region

3p21.31 [48,445,261 - 48,471,594]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR002909	Cell surface receptor IPT/TIG
IPR014756	Immunoglobulin E-set
IPR003659	Plexin/semaphorin/integrin
IPR001627	Semaphorin/CD100 antigen
IPR015943	WD40/YVTN repeat-like-containing domain

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0007411	axon guidance
GO:0016477	cell migration
GO:0033689	negative regulation of osteoblast proliferation
GO:0048812	neuron projection morphogenesis
GO:0043931	ossification involved in bone maturation
GO:0050772	positive regulation of axonogenesis
GO:0014068	positive regulation of phosphoinositide 3-kinase cascade
GO:0032321	positive regulation of Rho GTPase activity
GO:0008360	regulation of cell shape
GO:0051493	regulation of cytoskeleton organization
GO:0007165	signal transduction

Cellular Component

GO:0005576	extracellular region
GO:0005887	integral to plasma membrane
GO:0005622	intracellular
GO:0005886	plasma membrane
GO:0002116	semaphorin receptor complex

Molecular Function

GO:0032794	GTPase activating protein binding
GO:0005515	protein binding
GO:0004872	receptor activity
GO:0017154	semaphorin receptor activity
GO:0030215	semaphorin receptor binding
GO:0004888	transmembrane receptor activity

plexin B1

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function