GATA zinc finger domain containing 2A

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Synonym

GATAD2A, GATA zinc finger domain-containing protein 2A, p66alpha, Transcriptional repressor p66 alpha, GATA zinc finger domain containing 2A, Hp66alpha, FLJ20085

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:6.43 cerebellum:6.14 brain stem:6.31 corpus callosum/glia:6.40 pineal gland:- peripheral nerve:7.20 spine:6.83 retina:- eye:- artery/aorta:7.29 vein:7.40 lymphnode:7.61 peripheral blood:- spleen:8.01 thymus:7.40 bone marrow:7.84 adipose:7.10 bone:- skin:7.43
CAGE cerebrum:3.46 cerebellum:- brain stem:3.25 corpus callosum/glia:3.42 pineal gland:3.63 peripheral nerve:- spine:3.80 retina:- eye:- artery/aorta:4.15 vein:3.80 lymphnode:4.14 peripheral blood:- spleen:4.18 thymus:4.18 bone marrow:- adipose:3.85 bone:- skin:-
RNA-seq cerebrum:2.51 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.54 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.18 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:7.03 placenta:7.76 prostate:6.31 ovary:7.18 testis:8.32 heart:6.74 muscle:6.14 esophagus:7.41 stomach:7.32 intestine:7.41 colon:7.81 liver/hepato:7.20 lung:7.50 bladder:- kidney:7.49 pituitary:7.09 thyroid/parathyroid:7.33 adrenal gland:7.38 pancreas:7.41 breast:7.49 salivary:6.92
CAGE uterus:3.59 placenta:4.07 prostate:3.34 ovary:3.62 testis:4.48 heart:3.83 muscle:3.52 esophagus:3.63 stomach:- intestine:3.94 colon:4.11     liver/hepato:4.04    lung:4.03 bladder:3.67 kidney:3.86 pituitary:3.53 thyroid/parathyroid:3.51 adrenal gland:- pancreas:4.09 breast:4.17 salivary:3.50
RNA-seq uterus:- placenta:- prostate:2.94 ovary:3.70 testis:4.54 heart:1.95 muscle:3.03 esophagus:- stomach:- intestine:- colon:2.94     liver/hepato:2.82        lung:3.96    bladder:- kidney:3.14 pituitary:- thyroid/parathyroid:3.66 adrenal gland:3.98 pancreas:- breast:3.55 salivary:-

Gene Information

IDs

Refseq ID NM_017660
Gene ID 54815
Unigene ID -
Probe set ID 218131_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000167491
GTEx ID ENSG00000167491

Orthologous Gene

Mouse[12]  NM_001113345, NM_001113346, NM_145596
Rat[1]  NM_001013881, NM_001113346, NM_145596

Chromosomal Region

19p13.11  [19,496,639  -  19,619,740]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8125298
12183469
12477932
14702039
15489334
16169070
16344560
16415179
16738318
16751776
16964243
18029348
18854154
19322201
19454010
19471022
20201926
21258344
21532573
21693764
21890473
21906983
21963094
22939629
23239876
23667531
23752268
23974872
24250222
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0021506  anterior neuropore closure
GO:0001568  blood vessel development
GO:0006306  DNA methylation
GO:0010172  embryonic body morphogenesis
GO:0001701  in utero embryonic development
GO:0045892  negative regulation of transcription, DNA-dependent
GO:0001842  neural fold formation
GO:0012501  programmed cell death
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0016607  nuclear speck
GO:0005730  nucleolus
GO:0005634  nucleus
GO:0016581  NuRD complex

Molecular Function

GO:0005515  protein binding
GO:0030674  protein binding, bridging
GO:0043565  sequence-specific DNA binding
GO:0003700  transcription factor activity
GO:0008270  zinc ion binding