Wolf-Hirschhorn syndrome candidate 1-like 1

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Synonym

pp14328, Wolf-Hirschhorn syndrome candidate 1-like 1, NSD3, MGC142029, WHSC1L1, MGC126766, FLJ20353

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:4.97 cerebellum:4.90 brain stem:4.96 corpus callosum/glia:5.07 pineal gland:- peripheral nerve:5.06 spine:5.01 retina:- eye:- artery/aorta:5.04 vein:5.10 lymphnode:5.20 peripheral blood:- spleen:5.22 thymus:5.05 bone marrow:5.38 adipose:4.94 bone:- skin:4.91
CAGE cerebrum:3.75 cerebellum:- brain stem:3.76 corpus callosum/glia:3.46 pineal gland:4.04 peripheral nerve:- spine:3.46 retina:- eye:- artery/aorta:3.44 vein:3.09 lymphnode:3.14 peripheral blood:- spleen:3.04 thymus:3.36 bone marrow:- adipose:2.97 bone:- skin:-
RNA-seq cerebrum:2.38 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.02 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.00 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:4.93 placenta:5.33 prostate:4.86 ovary:4.83 testis:4.66 heart:4.97 muscle:4.90 esophagus:4.83 stomach:5.09 intestine:4.88 colon:4.92 liver/hepato:4.93 lung:4.91 bladder:- kidney:4.71 pituitary:4.94 thyroid/parathyroid:4.79 adrenal gland:4.70 pancreas:5.07 breast:5.01 salivary:4.89
CAGE uterus:3.14 placenta:3.16 prostate:3.36 ovary:3.03 testis:2.62 heart:2.91 muscle:2.31 esophagus:2.86 stomach:- intestine:3.18 colon:3.16     liver/hepato:2.22    lung:3.35 bladder:3.15 kidney:2.75 pituitary:3.58 thyroid/parathyroid:3.07 adrenal gland:- pancreas:2.94 breast:3.40 salivary:2.46
RNA-seq uterus:- placenta:- prostate:1.90 ovary:2.36 testis:1.78 heart:1.50 muscle:1.00 esophagus:- stomach:- intestine:- colon:2.01     liver/hepato:0.54        lung:2.36    bladder:- kidney:1.40 pituitary:- thyroid/parathyroid:1.50 adrenal gland:1.49 pancreas:- breast:1.69 salivary:-

Gene Information

IDs

Refseq ID NM_023034
Gene ID 54904
Unigene ID -
Probe set ID 221248_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000147548
GTEx ID ENSG00000147548

Orthologous Gene

Mouse[2]  NM_001001735, NM_001081269
Rat[1]  NM_001106090, NM_001081269

Chromosomal Region

8p11.23  [38,132,544  -  38,239,790]

Gene Family (Interpro ID)

IPR019787  Zinc finger, PHD-finger
IPR001965  Zinc finger, PHD-type

Link to Pubmed  (Pubmed ID)

10802047
11374904
11549311
11986249
12477932
14702039
15489334
15983384
16682010
18029348
19471022
20599755
20670891
20936779
20940404
20972266
21555454
22037555
23011637
23269674
23455924
24051013

Gene Ontology  (GO ID)

Biological Process

GO:0030154  cell differentiation
GO:0016049  cell growth
GO:0034968  histone lysine methylation
GO:0016571  histone methylation
GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005694  chromosome
GO:0005634  nucleus

Molecular Function

GO:0018024  histone-lysine N-methyltransferase activity
GO:0008270  zinc ion binding