La ribonucleoprotein domain family, member 6

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Synonym

La ribonucleoprotein domain family, member 6, acheron, LARP6, FLJ11196

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:65.20 cerebellum:25.20 brain stem:- corpus callosum/glia:87.50 pineal gland:- peripheral nerve:30.70 spine:- retina:- eye:58.80 artery/aorta:- vein:66.60 lymphnode:- peripheral blood:- spleen:- thymus:12.90 bone marrow:39.40 adipose:- bone:12.80 skin:19.20
GeneChip nodata
CAGE cerebrum:4.64 cerebellum:- brain stem:5.05 corpus callosum/glia:5.43 pineal gland:3.42 peripheral nerve:- spine:4.68 retina:- eye:- artery/aorta:4.61 vein:3.72 lymphnode:2.18 peripheral blood:- spleen:1.43 thymus:1.94 bone marrow:- adipose:3.98 bone:- skin:-
RNA-seq cerebrum:6.34 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.54 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.26 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:18.20 placenta:10.90 prostate:33.80 ovary:74.50 testis:8.70 heart:89.40 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:10.60        lung:29.30    bladder:125.60 kidney:41.60 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:26.70 breast:- salivary:-
GeneChip nodata
CAGE uterus:3.74 placenta:2.77 prostate:3.73 ovary:3.77 testis:3.28 heart:4.62 muscle:3.36 esophagus:3.21 stomach:- intestine:1.97 colon:2.93     liver/hepato:2.81    lung:3.13 bladder:3.79 kidney:3.89 pituitary:3.45 thyroid/parathyroid:4.50 adrenal gland:- pancreas:3.02 breast:4.94 salivary:3.69
RNA-seq uterus:- placenta:- prostate:1.90 ovary:2.44 testis:5.20 heart:2.32 muscle:1.30 esophagus:- stomach:- intestine:- colon:2.47     liver/hepato:1.89        lung:2.52    bladder:- kidney:3.66 pituitary:- thyroid/parathyroid:5.03 adrenal gland:3.06 pancreas:- breast:5.45 salivary:-

Gene Information

IDs

Refseq ID NM_197958
Gene ID 55323
Unigene ID Hs.416755
Probe set ID -
Ensembl ID ENSG00000166173
GTEx ID ENSG00000166173

Orthologous Gene

Mouse[1]  NM_026235
Rat[1]  NM_001108154

Chromosomal Region

15q23  [71,123,891  -  71,146,498]

Gene Family (Interpro ID)

IPR006630  RNA-binding protein Lupus La
IPR011991  Winged helix repressor DNA-binding

Link to Pubmed  (Pubmed ID)

12477932
14702039
15489334
16344560
17081983
17383118
18029348
19889961
19917293
21387291
21832049
21873549
22139627
22558309
23887937
24469459

Gene Ontology  (GO ID)

Biological Process

GO:0006417  regulation of translation
GO:0006396  RNA processing

Cellular Component

GO:0005794  Golgi apparatus
GO:0043231  intracellular membrane-bounded organelle
GO:0005730  nucleolus
GO:0005634  nucleus
GO:0030529  ribonucleoprotein complex

Molecular Function

GO:0000166  nucleotide binding
GO:0003723  RNA binding