AT rich interactive domain 1B (SWI1-like)

Synonym

OSA2, AT rich interactive domain 1B (SWI1-like), BRIGHT, p250R, DAN15, BAF250B, BRG1-binding protein hELD/OSA1, Osa homolog 2, hOsa2, BRG1-associated factor 250b, ARID1B, BAF250b, KIAA1235, AT-rich interactive domain-containing protein 1B, 6A3-5, ELD/OSA1, ARID domain-containing protein 1B

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:72.30

cerebellum:12.60

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:184

spine:-

retina:118.60

eye:123.40

artery/aorta:30

vein:-

lymphnode:242.60

peripheral blood:36.40

spleen:56.70

thymus:116

bone marrow:551.10

adipose:-

bone:51.20

skin:124.80

GeneChip

nodata

CAGE

cerebrum:3.74

cerebellum:-

brain stem:3.63

corpus callosum/glia:3.97

pineal gland:4.03

peripheral nerve:-

spine:3.71

retina:-

eye:-

artery/aorta:3.85

vein:3.85

lymphnode:4.01

peripheral blood:-

spleen:3.98

thymus:3.79

bone marrow:-

adipose:3.56

bone:-

skin:-

RNA-seq

cerebrum:0.00

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:0.00

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:0.42

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:54.70

placenta:145.70

prostate:180.20

ovary:335.40

testis:30.30

heart:89.40

muscle:40.20

esophagus:-

stomach:148.70

intestine:64.80

colon:93.30

liver/hepato:63.30

lung:161.30

bladder:-

kidney:83.20

pituitary:116

thyroid/parathyroid:-

adrenal gland:-

pancreas:35.60

breast:204.40

salivary:-

GeneChip

nodata

CAGE

uterus:3.92

placenta:3.07

prostate:3.78

ovary:3.81

testis:3.29

heart:3.44

muscle:3.62

esophagus:3.31

stomach:-

intestine:3.29

colon:3.45

liver/hepato:2.54

lung:3.76

bladder:3.49

kidney:3.06

pituitary:3.79

thyroid/parathyroid:3.70

adrenal gland:-

pancreas:3.63

breast:3.54

salivary:3.29

RNA-seq

uterus:-

placenta:-

prostate:0.62

ovary:0.00

testis:0.00

heart:0.00

muscle:0.00

esophagus:-

stomach:-

intestine:-

colon:0.00

liver/hepato:0.00

lung:0.00

bladder:-

kidney:0.30

pituitary:-

thyroid/parathyroid:1.00

adrenal gland:0.31

pancreas:-

breast:0.00

salivary:-

IDs

Refseq ID	NM_020732
Gene ID	57492
Unigene ID	Hs.291587
Probe set ID	-
Ensembl ID	ENSG00000049618
GTEx ID	ENSG00000049618

Orthologous Gene

Mouse[1]	NM_001085355
Rat[1]	NM_001085355

Chromosomal Region

6q25.3 [157,099,063 - 157,530,401]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0048096	chromatin-mediated maintenance of transcription
GO:0007399	nervous system development
GO:0006351	transcription, DNA-dependent

Cellular Component

GO:0043231	intracellular membrane-bounded organelle
GO:0005730	nucleolus
GO:0005634	nucleus
GO:0016514	SWI/SNF complex

Molecular Function

GO:0003677	DNA binding
GO:0005515	protein binding
GO:0003713	transcription coactivator activity