ribosomal protein S13

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Synonym

40S ribosomal protein S13, ribosomal protein S13, RPS13

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:28.40 cerebellum:12.60 brain stem:- corpus callosum/glia:29.20 pineal gland:296.70 peripheral nerve:214.70 spine:- retina:118.60 eye:58.80 artery/aorta:359.70 vein:999.70 lymphnode:101.10 peripheral blood:455.50 spleen:94.50 thymus:167.50 bone marrow:216.50 adipose:40.30 bone:25.60 skin:72
GeneChip nodata
CAGE cerebrum:4.62 cerebellum:- brain stem:4.77 corpus callosum/glia:5.14 pineal gland:4.25 peripheral nerve:- spine:5.10 retina:- eye:- artery/aorta:5.65 vein:5.77 lymphnode:6.14 peripheral blood:- spleen:5.97 thymus:6.05 bone marrow:- adipose:5.90 bone:- skin:-
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:72.90 placenta:83.80 prostate:180.20 ovary:111.80 testis:30.30 heart:332.10 muscle:221 esophagus:- stomach:- intestine:32.40 colon:195     liver/hepato:116.10        lung:107.50    bladder:- kidney:20.80 pituitary:- thyroid/parathyroid:327.50 adrenal gland:- pancreas:124.50 breast:473.90 salivary:-
GeneChip nodata
CAGE uterus:5.50 placenta:5.74 prostate:6.05 ovary:6.51 testis:5.28 heart:5.53 muscle:5.81 esophagus:6.20 stomach:- intestine:5.74 colon:5.64     liver/hepato:5.98    lung:5.77 bladder:6.13 kidney:5.64 pituitary:4.96 thyroid/parathyroid:5.94 adrenal gland:- pancreas:6.58 breast:5.74 salivary:5.10
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001017000
Gene ID 6207
Unigene ID Hs.446588
Probe set ID -
Ensembl ID -
GTEx ID -

Orthologous Gene

Mouse [0]  
Rat [0]  

Chromosomal Region

11p15.1  [17,095,936  -  17,099,334]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

2403345
6188845
7821789
8332508
8706699
8722009
8920921
9582194
11306805
11790298
12054647
12477932
12588972
12861018
14743216
15149863
15189156
15489334
15592455
15680243
15883184
16051665
16159877
16196087
17081983
17361185
17620599
17881366
18274552
18457437
19596686
19738201
19805454
19912438
19946888
20434207
20639865
21139048
21145461
21182205
21319273
21853274
21890473
21906983
21963094
22145905
22295575
22354994
22505724
22623428
22779921
22797925
22863883
22912744
22939629
23000965
23184937
23383273
23463506
24250222
24457600
24657165
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0044267  cellular protein metabolic process
GO:0010467  gene expression
GO:0016071  mRNA metabolic process
GO:0033119  negative regulation of RNA splicing
GO:0000184  nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0016070  RNA metabolic process
GO:0006614  SRP-dependent cotranslational protein targeting to membrane
GO:0006412  translation
GO:0006414  translational elongation
GO:0006413  translational initiation
GO:0006415  translational termination
GO:0019058  viral infectious cycle
GO:0016032  viral reproduction
GO:0019083  viral transcription

Cellular Component

GO:0005829  cytosol
GO:0022627  cytosolic small ribosomal subunit
GO:0005730  nucleolus
GO:0005634  nucleus
GO:0005840  ribosome

Molecular Function

GO:0003729  mRNA binding
GO:0005515  protein binding
GO:0003735  structural constituent of ribosome