PR domain containing 1, with ZNF domain

Synonym

PRDI-BF1, PR domain containing 1, with ZNF domain, MGC118922, Positive regulatory domain I-binding factor 1, MGC118925, MGC118924, PR domain-containing protein 1, MGC118923, PRDI-binding factor 1, BLIMP-1, PR domain zinc finger protein 1, PRDM1, BLIMP1

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:3.60

cerebellum:12.60

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:23.50

artery/aorta:-

vein:-

lymphnode:121.30

peripheral blood:-

spleen:-

thymus:38.70

bone marrow:-

adipose:-

bone:12.80

skin:86.40

GeneChip

cerebrum:5.74

cerebellum:5.78

brain stem:5.81

corpus callosum/glia:5.53

pineal gland:-

peripheral nerve:5.80

spine:5.85

retina:-

eye:-

artery/aorta:5.81

vein:6.02

lymphnode:6.39

peripheral blood:-

spleen:5.99

thymus:5.32

bone marrow:6.03

adipose:6.12

bone:-

skin:6.10

CAGE

cerebrum:2.04

cerebellum:-

brain stem:1.75

corpus callosum/glia:1.95

pineal gland:1.78

peripheral nerve:-

spine:2.89

retina:-

eye:-

artery/aorta:2.96

vein:3.46

lymphnode:4.64

peripheral blood:-

spleen:4.14

thymus:2.14

bone marrow:-

adipose:3.50

bone:-

skin:-

RNA-seq

cerebrum:0.33

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:2.83

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:1.28

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:18.20

placenta:14.60

prostate:-

ovary:37.30

testis:-

heart:-

muscle:-

esophagus:-

stomach:42.50

intestine:129.60

colon:8.50

liver/hepato:10.60

lung:29.30

bladder:-

kidney:20.80

pituitary:-

thyroid/parathyroid:-

adrenal gland:50.80

pancreas:-

breast:18.60

salivary:-

GeneChip

uterus:6.07

placenta:5.55

prostate:5.60

ovary:5.48

testis:5.34

heart:5.72

muscle:5.57

esophagus:6.93

stomach:6.54

intestine:6.27

colon:6.70

liver/hepato:5.89

lung:6.52

bladder:-

kidney:5.65

pituitary:5.65

thyroid/parathyroid:6.02

adrenal gland:5.80

pancreas:5.93

breast:5.69

salivary:6.02

CAGE

uterus:3.51

placenta:3.13

prostate:2.46

ovary:2.53

testis:1.77

heart:2.07

muscle:1.70

esophagus:4.37

stomach:-

intestine:3.86

colon:3.42

liver/hepato:1.79

lung:3.95

bladder:3.54

kidney:2.25

pituitary:1.05

thyroid/parathyroid:2.79

adrenal gland:-

pancreas:1.59

breast:2.99

salivary:3.48

RNA-seq

uterus:-

placenta:-

prostate:0.88

ovary:0.72

testis:0.47

heart:0.35

muscle:0.26

esophagus:-

stomach:-

intestine:-

colon:0.58

liver/hepato:0.59

lung:2.32

bladder:-

kidney:0.60

pituitary:-

thyroid/parathyroid:1.17

adrenal gland:2.19

pancreas:-

breast:0.88

salivary:-

IDs

Refseq ID	NM_182907
Gene ID	639
Unigene ID	Hs.436023
Probe set ID	217192_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000057657
GTEx ID	ENSG00000057657

Orthologous Gene

Mouse[1]	NM_007548
Rat[1]	NM_001107639

Chromosomal Region

6q21 [106,534,195 - 106,557,814]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR015880	Zinc finger, C2H2-like
IPR007087	Zinc finger, C2H2-type

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0045165	cell fate commitment
GO:0001892	embryonic placenta development
GO:0042462	eye photoreceptor cell development
GO:0007281	germ cell development
GO:0001893	maternal placenta development
GO:0030889	negative regulation of B cell proliferation
GO:0031665	negative regulation of lipopolysaccharide-mediated signaling pathway
GO:0000122	negative regulation of transcription from RNA polymerase II promoter
GO:0045579	positive regulation of B cell differentiation
GO:0010628	positive regulation of gene expression
GO:0006351	transcription, DNA-dependent

Cellular Component

GO:0005737	cytoplasm
GO:0005634	nucleus

Molecular Function

GO:0042826	histone deacetylase binding
GO:0046872	metal ion binding
GO:0008168	methyltransferase activity
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity

PR domain containing 1, with ZNF domain

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function