sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)

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Synonym

43DAG, SGC, 43 kDa dystrophin-associated glycoprotein, LGMD2E, Beta-SG, A3b, Beta-sarcoglycan, SGCB

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:79.40 cerebellum:12.60 brain stem:- corpus callosum/glia:29.20 pineal gland:296.70 peripheral nerve:61.30 spine:112.30 retina:- eye:47 artery/aorta:149.90 vein:- lymphnode:10.10 peripheral blood:- spleen:18.90 thymus:12.90 bone marrow:39.40 adipose:- bone:25.60 skin:110.40
GeneChip cerebrum:4.70 cerebellum:4.49 brain stem:4.75 corpus callosum/glia:4.86 pineal gland:- peripheral nerve:5.12 spine:4.82 retina:- eye:- artery/aorta:4.20 vein:5.14 lymphnode:3.68 peripheral blood:- spleen:4.02 thymus:3.56 bone marrow:3.39 adipose:4.14 bone:- skin:3.50
CAGE cerebrum:3.23 cerebellum:- brain stem:3.71 corpus callosum/glia:3.63 pineal gland:2.72 peripheral nerve:- spine:3.43 retina:- eye:- artery/aorta:3.60 vein:2.40 lymphnode:1.82 peripheral blood:- spleen:2.39 thymus:1.26 bone marrow:- adipose:3.06 bone:- skin:-
RNA-seq cerebrum:4.66 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.88 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.61 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:27.30 placenta:40.10 prostate:11.30 ovary:- testis:30.30 heart:51.10 muscle:80.40 esophagus:- stomach:169.90 intestine:97.20 colon:50.90     liver/hepato:52.80        lung:4.90    bladder:125.60 kidney:52 pituitary:- thyroid/parathyroid:- adrenal gland:50.80 pancreas:53.30 breast:46.50 salivary:-
GeneChip uterus:4.42 placenta:4.07 prostate:4.25 ovary:4.56 testis:3.85 heart:5.14 muscle:5.61 esophagus:4.13 stomach:4.41 intestine:4.65 colon:4.40 liver/hepato:4.07 lung:4.26 bladder:- kidney:4.73 pituitary:3.96 thyroid/parathyroid:3.89 adrenal gland:4.29 pancreas:4.01 breast:4.14 salivary:4.11
CAGE uterus:3.23 placenta:2.65 prostate:3.36 ovary:3.17 testis:2.73 heart:3.46 muscle:3.51 esophagus:3.20 stomach:- intestine:2.72 colon:2.88     liver/hepato:2.28    lung:2.20 bladder:3.34 kidney:3.55 pituitary:3.14 thyroid/parathyroid:2.79 adrenal gland:- pancreas:2.26 breast:2.91 salivary:2.31
RNA-seq uterus:- placenta:- prostate:5.05 ovary:4.20 testis:4.69 heart:4.80 muscle:5.16 esophagus:- stomach:- intestine:- colon:5.24     liver/hepato:1.92        lung:4.16    bladder:- kidney:4.52 pituitary:- thyroid/parathyroid:3.73 adrenal gland:3.47 pancreas:- breast:5.01 salivary:-

Gene Information

IDs

Refseq ID NM_000232
Gene ID 6443
Unigene ID Hs.438953
Probe set ID 205121_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000163069
GTEx ID ENSG00000163069

Orthologous Gene

Mouse[2]  NM_011890
Rat [0]  

Chromosomal Region

4q12  [52,886,872  -  52,904,648]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

2081733
7581448
7581449
8968749
9032047
9521867
9565988
9631401
9864373
10660328
10662809
10678176
10767327
10874299
10928275
10942431
10993904
11747090
12060343
12189167
12477932
14702039
15489334
15954112
16088906
16934466
17036316
17993586
18051367
18996010
20301582
21139048
21906983
24250222

Gene Ontology  (GO ID)

Biological Process

GO:0035051  cardiac cell differentiation
GO:0007517  muscle organ development

Cellular Component

GO:0005737  cytoplasm
GO:0005856  cytoskeleton
GO:0016010  dystrophin-associated glycoprotein complex
GO:0005887  integral to plasma membrane
GO:0016012  sarcoglycan complex
GO:0042383  sarcolemma