small nuclear ribonucleoprotein polypeptide A

 jump to detail

Synonym

U1A, U1-A, small nuclear ribonucleoprotein polypeptide A, U1 snRNP protein A, U1 small nuclear ribonucleoprotein A, SNRPA, U1A protein

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:51 cerebellum:12.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:61.30 spine:112.30 retina:- eye:58.80 artery/aorta:- vein:- lymphnode:60.70 peripheral blood:109.30 spleen:18.90 thymus:38.70 bone marrow:- adipose:- bone:51.20 skin:24
GeneChip cerebrum:7.22 cerebellum:6.91 brain stem:7.03 corpus callosum/glia:7.25 pineal gland:- peripheral nerve:7.56 spine:7.26 retina:- eye:- artery/aorta:8.25 vein:7.72 lymphnode:8.65 peripheral blood:- spleen:8.54 thymus:8.76 bone marrow:8.26 adipose:7.95 bone:- skin:8.13
CAGE cerebrum:4.41 cerebellum:- brain stem:4.10 corpus callosum/glia:3.98 pineal gland:4.27 peripheral nerve:- spine:4.84 retina:- eye:- artery/aorta:4.98 vein:4.54 lymphnode:4.87 peripheral blood:- spleen:4.50 thymus:4.85 bone marrow:- adipose:4.28 bone:- skin:-
RNA-seq cerebrum:2.83 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.68 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.49 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:45.60 placenta:87.40 prostate:67.60 ovary:111.80 testis:99.50 heart:63.90 muscle:20.10 esophagus:- stomach:21.20 intestine:- colon:127.20     liver/hepato:42.20        lung:34.20    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:327.50 adrenal gland:101.60 pancreas:44.50 breast:18.60 salivary:-
GeneChip uterus:8.22 placenta:7.63 prostate:8.04 ovary:8.33 testis:8.33 heart:7.34 muscle:7.31 esophagus:8.19 stomach:8.07 intestine:7.80 colon:8.52 liver/hepato:7.59 lung:7.75 bladder:- kidney:7.66 pituitary:7.81 thyroid/parathyroid:8.35 adrenal gland:7.94 pancreas:7.77 breast:8.40 salivary:7.69
CAGE uterus:4.54 placenta:4.02 prostate:4.47 ovary:4.52 testis:4.51 heart:4.35 muscle:4.62 esophagus:4.38 stomach:- intestine:4.11 colon:4.62     liver/hepato:4.03    lung:4.45 bladder:4.65 kidney:3.97 pituitary:4.63 thyroid/parathyroid:4.53 adrenal gland:- pancreas:4.57 breast:4.85 salivary:4.05
RNA-seq uterus:- placenta:- prostate:5.13 ovary:4.40 testis:4.32 heart:2.45 muscle:4.22 esophagus:- stomach:- intestine:- colon:4.43     liver/hepato:2.72        lung:4.92    bladder:- kidney:3.51 pituitary:- thyroid/parathyroid:4.27 adrenal gland:4.55 pancreas:- breast:3.94 salivary:-

Gene Information

IDs

Refseq ID NM_004596
Gene ID 6626
Unigene ID Hs.466775
Probe set ID 201770_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000077312
GTEx ID ENSG00000077312

Orthologous Gene

Mouse[2]  NM_001046637, NM_015782
Rat[1]  NM_001008303, NM_015782

Chromosomal Region

19q13.2  [41,256,759  -  41,271,296]

Gene Family (Interpro ID)

IPR000504  RNA recognition motif, RNP-1

Link to Pubmed  (Pubmed ID)

1696729
1701111
1826055
1831431
1833186
2147232
2962859
7984237
8070414
8602269
8609632
9265619
9312034
9731529
9783582
9848648
10648562
10688667
10742179
11101529
11420046
12226669
12477932
15146197
15231748
15489334
15635413
15890361
16055720
16189514
17332742
17353931
17361185
17507659
17942741
17955473
18457437
18854154
19373254
19561594
19738201
20085233
20508642
21139048
21145461
21298455
21319273
21384338
21419778
21566083
21642987
21890473
21906983
22365833
22863883
22939629
23151878
23166591
23184937
23602568
24362020
24457600
24778252
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0010467  gene expression
GO:0000398  nuclear mRNA splicing, via spliceosome
GO:0008380  RNA splicing

Cellular Component

GO:0005654  nucleoplasm
GO:0005681  spliceosomal complex

Molecular Function

GO:0000166  nucleotide binding
GO:0005515  protein binding
GO:0003723  RNA binding
GO:0017069  snRNA binding