spectrin, beta, non-erythrocytic 1

Synonym

spectrin, beta, non-erythrocytic 1, SPTB2, ELF, Fodrin beta chain, betaSpII, SPTBN1, Beta-II spectrin, Spectrin, non-erythroid beta chain 1, Spectrin beta chain, brain 1

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:224

cerebellum:100.80

brain stem:-

corpus callosum/glia:116.60

pineal gland:296.70

peripheral nerve:950.80

spine:673.80

retina:118.60

eye:246.80

artery/aorta:89.90

vein:-

lymphnode:131.40

peripheral blood:72.90

spleen:132.30

thymus:25.80

bone marrow:393.60

adipose:1008.30

bone:115.20

skin:571.20

GeneChip

cerebrum:11.14

cerebellum:10.74

brain stem:11.02

corpus callosum/glia:10.61

pineal gland:-

peripheral nerve:11.64

spine:11.01

retina:-

eye:-

artery/aorta:11.16

vein:10.88

lymphnode:9.88

peripheral blood:-

spleen:10.39

thymus:9.62

bone marrow:8.76

adipose:11.53

bone:-

skin:10.35

CAGE

cerebrum:6.27

cerebellum:-

brain stem:6.09

corpus callosum/glia:6.35

pineal gland:5.75

peripheral nerve:-

spine:6.08

retina:-

eye:-

artery/aorta:6.06

vein:5.92

lymphnode:4.89

peripheral blood:-

spleen:5.82

thymus:4.41

bone marrow:-

adipose:6.74

bone:-

skin:-

RNA-seq

cerebrum:6.12

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:5.65

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:7.16

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:154.90

placenta:240.40

prostate:180.20

ovary:74.50

testis:134.10

heart:383.20

muscle:140.60

esophagus:342.80

stomach:446.10

intestine:97.20

colon:848

liver/hepato:105.60

lung:234.60

bladder:-

kidney:197.50

pituitary:-

thyroid/parathyroid:-

adrenal gland:101.60

pancreas:204.50

breast:278.80

salivary:-

GeneChip

uterus:10.25

placenta:9.91

prostate:10.32

ovary:10.54

testis:9.73

heart:10.83

muscle:9.09

esophagus:9.89

stomach:10.34

intestine:9.97

colon:10.47

liver/hepato:10.05

lung:11.61

bladder:-

kidney:10.68

pituitary:10.10

thyroid/parathyroid:10.95

adrenal gland:11.13

pancreas:9.24

breast:10.62

salivary:10.07

CAGE

uterus:5.87

placenta:5.37

prostate:5.82

ovary:5.75

testis:5.60

heart:6.45

muscle:5.27

esophagus:5.69

stomach:-

intestine:5.25

colon:5.41

liver/hepato:5.44

lung:6.52

bladder:5.79

kidney:5.58

pituitary:5.18

thyroid/parathyroid:5.61

adrenal gland:-

pancreas:4.85

breast:6.78

salivary:5.46

RNA-seq

uterus:-

placenta:-

prostate:5.60

ovary:5.66

testis:6.25

heart:5.23

muscle:3.93

esophagus:-

stomach:-

intestine:-

colon:6.03

liver/hepato:4.39

lung:7.06

bladder:-

kidney:5.35

pituitary:-

thyroid/parathyroid:5.63

adrenal gland:5.29

pancreas:-

breast:7.49

salivary:-

IDs

Refseq ID	NM_003128
Gene ID	6711
Unigene ID	Hs.503178
Probe set ID	212071_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000115306
GTEx ID	ENSG00000115306

Orthologous Gene

Mouse[5]	NM_009260, NM_175836
Rat[1]	NM_001013130, NM_175836

Chromosomal Region

2p16.2 [54,683,422 - 54,896,812]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR016146	Calponin-homology
IPR001715	Calponin-like actin-binding
IPR001849	Pleckstrin homology
IPR018159	Spectrin/alpha-actinin
IPR001605	Spectrin/pleckstrin-like

GO:0051693	actin filament capping
GO:0007411	axon guidance
GO:0007182	common-partner SMAD protein phosphorylation
GO:0000281	cytokinesis after mitosis
GO:0043001	Golgi to plasma membrane protein transport
GO:0007009	plasma membrane organization
GO:0007184	SMAD protein nuclear translocation

GO:0030673	axolemma
GO:0032437	cuticular plate
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0031430	M band
GO:0005730	nucleolus
GO:0008091	spectrin
GO:0014731	spectrin-associated cytoskeleton

GO:0003779	actin binding
GO:0030506	ankyrin binding
GO:0005516	calmodulin binding
GO:0005543	phospholipid binding
GO:0005515	protein binding
GO:0005200	structural constituent of cytoskeleton

spectrin, beta, non-erythrocytic 1

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function