suppressor of var1, 3-like 1 (S. cerevisiae)

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Synonym

suppressor of var1, 3-like 1 (S. cerevisiae), SUPV3L1, SUV3, suppressor of var1 (S.cerevisiae) 3-like 1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:51 cerebellum:75.60 brain stem:- corpus callosum/glia:58.30 pineal gland:- peripheral nerve:30.70 spine:112.30 retina:- eye:52.90 artery/aorta:30 vein:- lymphnode:30.30 peripheral blood:91.10 spleen:18.90 thymus:38.70 bone marrow:19.70 adipose:121 bone:12.80 skin:14.40
GeneChip cerebrum:6.22 cerebellum:6.37 brain stem:6.28 corpus callosum/glia:5.85 pineal gland:- peripheral nerve:6.22 spine:5.88 retina:- eye:- artery/aorta:6.09 vein:5.87 lymphnode:6.35 peripheral blood:- spleen:6.34 thymus:6.38 bone marrow:5.90 adipose:6.15 bone:- skin:6.37
CAGE cerebrum:3.45 cerebellum:- brain stem:3.16 corpus callosum/glia:3.21 pineal gland:3.35 peripheral nerve:- spine:3.20 retina:- eye:- artery/aorta:2.88 vein:3.31 lymphnode:3.25 peripheral blood:- spleen:3.12 thymus:3.03 bone marrow:- adipose:3.21 bone:- skin:-
RNA-seq cerebrum:2.72 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.01 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.63 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:27.30 placenta:18.20 prostate:22.50 ovary:37.30 testis:30.30 heart:25.50 muscle:20.10 esophagus:- stomach:21.20 intestine:32.40 colon:42.40     liver/hepato:52.80        lung:39.10    bladder:- kidney:52 pituitary:- thyroid/parathyroid:163.70 adrenal gland:- pancreas:8.90 breast:18.60 salivary:328.40
GeneChip uterus:6.10 placenta:5.64 prostate:6.13 ovary:6.32 testis:7.01 heart:6.48 muscle:6.94 esophagus:6.11 stomach:6.16 intestine:6.05 colon:6.19 liver/hepato:6.19 lung:5.90 bladder:- kidney:6.34 pituitary:6.38 thyroid/parathyroid:6.14 adrenal gland:6.44 pancreas:5.32 breast:6.22 salivary:6
CAGE uterus:3.11 placenta:2.83 prostate:2.91 ovary:3.14 testis:3.83 heart:3.47 muscle:3.74 esophagus:2.92 stomach:- intestine:2.85 colon:3.32     liver/hepato:3.45    lung:2.93 bladder:2.83 kidney:3.04 pituitary:3.40 thyroid/parathyroid:2.94 adrenal gland:- pancreas:3.45 breast:3.56 salivary:3.26
RNA-seq uterus:- placenta:- prostate:3.26 ovary:3.45 testis:4.11 heart:3.45 muscle:3.39 esophagus:- stomach:- intestine:- colon:2.55     liver/hepato:3.26        lung:1.98    bladder:- kidney:3.35 pituitary:- thyroid/parathyroid:3.62 adrenal gland:3.53 pancreas:- breast:3.15 salivary:-

Gene Information

IDs

Refseq ID NM_003171
Gene ID 6832
Unigene ID Hs.106469
Probe set ID 212894_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000156502
GTEx ID ENSG00000156502

Orthologous Gene

Mouse[1]  NM_181423
Rat [0]  

Chromosomal Region

10q22.1  [70,939,988  -  70,968,855]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7566098
9925937
11154739
12466530
12477932
15096047
15919122
16176273
16385451
17352692
17373700
17961633
18063578
18678873
19322201
19509288
19864255
20186120
20877624
21139048
21145461
22610502
23221631
23903356
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0070827  chromatin maintenance
GO:0032508  DNA duplex unwinding
GO:0006310  DNA recombination
GO:0000958  mitochondrial mRNA catabolic process
GO:0000965  mitochondrial RNA 3'-end processing
GO:0070584  mitochondrion morphogenesis
GO:0043066  negative regulation of apoptosis
GO:0030307  positive regulation of cell growth
GO:0000962  positive regulation of mitochondrial RNA catabolic process
GO:0006401  RNA catabolic process

Cellular Component

GO:0045025  mitochondrial degradosome
GO:0005759  mitochondrial matrix
GO:0042645  mitochondrial nucleoid
GO:0005739  mitochondrion
GO:0005634  nucleus

Molecular Function

GO:0034458  3'-5' RNA helicase activity
GO:0005524  ATP binding
GO:0004004  ATP-dependent RNA helicase activity
GO:0003677  DNA binding
GO:0003678  DNA helicase activity
GO:0003725  double-stranded RNA binding
GO:0004386  helicase activity
GO:0005515  protein binding
GO:0042803  protein homodimerization activity
GO:0003723  RNA binding