tubby homolog (mouse)

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Synonym

tubby (mouse) homolog, rd5, TUB, Tubby protein homolog, tubby homolog (mouse)

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:24.90 cerebellum:63 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:61.30 spine:112.30 retina:- eye:82.30 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:12.80 skin:9.60
GeneChip cerebrum:6.25 cerebellum:6.27 brain stem:6.37 corpus callosum/glia:6.21 pineal gland:- peripheral nerve:6.04 spine:6.17 retina:- eye:- artery/aorta:6.24 vein:6.34 lymphnode:5.99 peripheral blood:- spleen:5.97 thymus:5.69 bone marrow:6.39 adipose:6.29 bone:- skin:6.31
CAGE cerebrum:3.77 cerebellum:- brain stem:3.36 corpus callosum/glia:2.93 pineal gland:3.55 peripheral nerve:- spine:3.42 retina:- eye:- artery/aorta:2.32 vein:2.09 lymphnode:1.27 peripheral blood:- spleen:0.39 thymus:1.12 bone marrow:- adipose:1.51 bone:- skin:-
RNA-seq cerebrum:3.52 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.44 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.47 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:36.50 placenta:- prostate:- ovary:- testis:30.30 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:4.90    bladder:- kidney:114.40 pituitary:- thyroid/parathyroid:- adrenal gland:50.80 pancreas:- breast:9.30 salivary:-
GeneChip uterus:6.05 placenta:6.18 prostate:5.87 ovary:6.05 testis:5.93 heart:6.34 muscle:6.25 esophagus:6.11 stomach:6.09 intestine:6.32 colon:6.52 liver/hepato:6.17 lung:6.19 bladder:- kidney:6.33 pituitary:6.38 thyroid/parathyroid:5.95 adrenal gland:6.16 pancreas:6.67 breast:6.12 salivary:6.23
CAGE uterus:3.24 placenta:0.88 prostate:2.63 ovary:2.36 testis:2.00 heart:2.48 muscle:0.54 esophagus:1.52 stomach:- intestine:1.35 colon:1.91     liver/hepato:0.26    lung:1.46 bladder:2.42 kidney:1.60 pituitary:3.47 thyroid/parathyroid:2.31 adrenal gland:- pancreas:1.87 breast:1.68 salivary:1.89
RNA-seq uterus:- placenta:- prostate:2.67 ovary:2.64 testis:2.48 heart:2.76 muscle:0.34 esophagus:- stomach:- intestine:- colon:1.62     liver/hepato:0.18        lung:1.79    bladder:- kidney:1.91 pituitary:- thyroid/parathyroid:2.82 adrenal gland:1.24 pancreas:- breast:1.37 salivary:-

Gene Information

IDs

Refseq ID NM_177972
Gene ID 7275
Unigene ID Hs.568986
Probe set ID 210737_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000166402
GTEx ID ENSG00000166402

Orthologous Gene

Mouse[2]  NM_021885
Rat[2]  NM_021885

Chromosomal Region

11p15.4  [8,040,791  -  8,127,659]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

1358794
8612280
9096357
10455176
10591637
11000483
11375483
11801719
12477932
15489334
16443771
17498679
17955208
18029348
18183286
19058789
19077438
19486527
19837063
19913121
20080650
20628086
20935630
20978472
22632162
23000965

Gene Ontology  (GO ID)

Biological Process

GO:0044259  multicellular organismal macromolecule metabolic process
GO:0006909  phagocytosis
GO:0007602  phototransduction
GO:0050766  positive regulation of phagocytosis
GO:0009725  response to hormone stimulus
GO:0060041  retina development in camera-type eye
GO:0007605  sensory perception of sound

Cellular Component

GO:0005737  cytoplasm
GO:0005829  cytosol
GO:0005576  extracellular region
GO:0043231  intracellular membrane-bounded organelle
GO:0005634  nucleus
GO:0005886  plasma membrane

Molecular Function

GO:0008020  G-protein coupled photoreceptor activity