xeroderma pigmentosum, complementation group A

jump to detail

Synonym

XPA, XP1, xeroderma pigmentosum, complementation group A, XPAC, DNA-repair protein complementing XP-A cells

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

nodata

GeneChip

nodata

CAGE

cerebrum:3.71

cerebellum:-

brain stem:3.58

corpus callosum/glia:3.61

pineal gland:4.02

peripheral nerve:-

spine:3.81

retina:-

eye:-

artery/aorta:3.64

vein:3.42

lymphnode:3.29

peripheral blood:-

spleen:3.47

thymus:3.31

bone marrow:-

adipose:3.49

bone:-

skin:-

RNA-seq

cerebrum:0.79

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:0.70

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:0.47

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

nodata

GeneChip

nodata

CAGE

uterus:3.94

placenta:3.18

prostate:3.69

ovary:3.49

testis:2.87

heart:3.27

muscle:3.98

esophagus:3.55

stomach:-

intestine:3.80

colon:3.60

liver/hepato:3.48

lung:3.35

bladder:3.82

kidney:3.52

pituitary:3.85

thyroid/parathyroid:3.51

adrenal gland:-

pancreas:2.60

breast:3.12

salivary:3.71

RNA-seq

uterus:-

placenta:-

prostate:1.25

ovary:0.85

testis:1.28

heart:0.60

muscle:0.08

esophagus:-

stomach:-

intestine:-

colon:0.61

liver/hepato:0.38

lung:0.68

bladder:-

kidney:0.70

pituitary:-

thyroid/parathyroid:0.35

adrenal gland:0.46

pancreas:-

breast:0.20

salivary:-

IDs

Refseq ID	NR_027302
Gene ID	7507
Unigene ID	-
Probe set ID	-
Ensembl ID	-
GTEx ID	-

Orthologous Gene

Mouse [0]
Rat [0]

Chromosomal Region

9q22.33 [100,437,191 - 100,459,639]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

GO:0008630	DNA damage response, signal transduction resulting in induction of apoptosis
GO:0006281	DNA repair
GO:0035264	multicellular organism growth
GO:0006289	nucleotide-excision repair
GO:0000718	nucleotide-excision repair, DNA damage removal
GO:0006979	response to oxidative stress
GO:0009636	response to toxin
GO:0009411	response to UV

GO:0005654	nucleoplasm
GO:0005634	nucleus

GO:0003684	damaged DNA binding
GO:0046872	metal ion binding
GO:0000166	nucleotide binding
GO:0005515	protein binding
GO:0019904	protein domain specific binding
GO:0042803	protein homodimerization activity

xeroderma pigmentosum, complementation group A

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function