stem-loop binding protein

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Synonym

SLBP, Histone RNA hairpin-binding protein, stem-loop (histone) binding protein, Histone stem-loop-binding protein

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:24.90

cerebellum:63

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:30.70

spine:-

retina:118.60

eye:35.30

artery/aorta:89.90

vein:-

lymphnode:111.20

peripheral blood:36.40

spleen:18.90

thymus:12.90

bone marrow:39.40

adipose:40.30

bone:51.20

skin:9.60

GeneChip

cerebrum:6.68

cerebellum:6.42

brain stem:6.68

corpus callosum/glia:6.09

pineal gland:-

peripheral nerve:6.52

spine:6.69

retina:-

eye:-

artery/aorta:6.29

vein:5.91

lymphnode:6.98

peripheral blood:-

spleen:6.80

thymus:8.04

bone marrow:7.42

adipose:6.66

bone:-

skin:7.04

CAGE

cerebrum:3.72

cerebellum:-

brain stem:3.39

corpus callosum/glia:3.39

pineal gland:3.31

peripheral nerve:-

spine:3.39

retina:-

eye:-

artery/aorta:3.79

vein:3.65

lymphnode:4.06

peripheral blood:-

spleen:3.91

thymus:4.46

bone marrow:-

adipose:3.50

bone:-

skin:-

RNA-seq

cerebrum:4.75

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:4.63

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:3.93

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:9.10

placenta:94.70

prostate:11.30

ovary:37.30

testis:77.90

heart:51.10

muscle:-

esophagus:-

stomach:-

intestine:-

colon:25.40

liver/hepato:52.80

lung:29.30

bladder:-

kidney:-

pituitary:116

thyroid/parathyroid:-

adrenal gland:-

pancreas:35.60

breast:46.50

salivary:-

GeneChip

uterus:7.06

placenta:6.52

prostate:7.20

ovary:7.03

testis:8.65

heart:5.76

muscle:5.63

esophagus:7.11

stomach:6.45

intestine:6.34

colon:6.56

liver/hepato:6.03

lung:6.43

bladder:-

kidney:6.74

pituitary:6.53

thyroid/parathyroid:6.69

adrenal gland:6.44

pancreas:5.58

breast:6.58

salivary:6.60

CAGE

uterus:3.74

placenta:3.95

prostate:3.79

ovary:3.86

testis:4.60

heart:3.59

muscle:3.38

esophagus:3.85

stomach:-

intestine:3.33

colon:3.80

liver/hepato:3.52

lung:3.79

bladder:3.87

kidney:3.81

pituitary:3.41

thyroid/parathyroid:3.87

adrenal gland:-

pancreas:3.37

breast:4.08

salivary:4.00

RNA-seq

uterus:-

placenta:-

prostate:4.65

ovary:4.65

testis:5.90

heart:2.77

muscle:3.09

esophagus:-

stomach:-

intestine:-

colon:4.33

liver/hepato:3.67

lung:4.25

bladder:-

kidney:4.66

pituitary:-

thyroid/parathyroid:4.40

adrenal gland:4.31

pancreas:-

breast:4.09

salivary:-

IDs

Refseq ID	NM_006527
Gene ID	7884
Unigene ID	Hs.298345
Probe set ID	206052_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000163950
GTEx ID	ENSG00000163950

Orthologous Gene

Mouse[1]	NM_009193
Rat[1]	NM_009193

GO:0033260	DNA replication during S phase
GO:0010467	gene expression
GO:0006398	histone mRNA 3'-end processing
GO:0008334	histone mRNA metabolic process
GO:0031124	mRNA 3'-end processing
GO:0006406	mRNA export from nucleus
GO:0051028	mRNA transport
GO:0033261	regulation of S phase
GO:0006369	termination of RNA polymerase II transcription
GO:0006366	transcription from RNA polymerase II promoter

GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0071204	histone pre-mRNA 3'end processing complex
GO:0005654	nucleoplasm
GO:0005634	nucleus
GO:0030529	ribonucleoprotein complex

GO:0071208	histone pre-mRNA DCP binding
GO:0071207	histone pre-mRNA stem-loop binding
GO:0003729	mRNA binding
GO:0005515	protein binding

stem-loop binding protein

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function