collectin sub-family member 11

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Synonym

COLEC11, MGC3279, collectin sub-family member 11, DKFZp686N1868

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:4.95 cerebellum:5.38 brain stem:4.94 corpus callosum/glia:4.68 pineal gland:- peripheral nerve:5.05 spine:5.12 retina:- eye:- artery/aorta:5.88 vein:5.75 lymphnode:5.79 peripheral blood:- spleen:5.31 thymus:5.33 bone marrow:4.77 adipose:5.78 bone:- skin:5.17
CAGE cerebrum:0.27 cerebellum:- brain stem:0.07 corpus callosum/glia:0.70 pineal gland:0.48 peripheral nerve:- spine:0.30 retina:- eye:- artery/aorta:0.79 vein:0.47 lymphnode:0.52 peripheral blood:- spleen:0.76 thymus:0.23 bone marrow:- adipose:0.84 bone:- skin:-
RNA-seq cerebrum:0.00 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.00 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:5.02 placenta:5.17 prostate:4.86 ovary:5.99 testis:5.92 heart:6.20 muscle:4.93 esophagus:5.02 stomach:5.48 intestine:5.80 colon:5.27 liver/hepato:7.84 lung:5.03 bladder:- kidney:6.98 pituitary:5.57 thyroid/parathyroid:6.07 adrenal gland:8.12 pancreas:6.44 breast:4.73 salivary:5.18
CAGE uterus:0.19 placenta:1.25 prostate:0.81 ovary:2.10 testis:1.31 heart:2.17 muscle:0.38 esophagus:0.57 stomach:- intestine:1.33 colon:0.46     liver/hepato:4.00    lung:0.21 bladder:0.64 kidney:1.21 pituitary:0.92 thyroid/parathyroid:1.83 adrenal gland:- pancreas:1.98 breast:0.90 salivary:0.36
RNA-seq uterus:- placenta:- prostate:0 ovary:0 testis:0 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0.03     liver/hepato:0        lung:0.00    bladder:- kidney:0 pituitary:- thyroid/parathyroid:0 adrenal gland:0 pancreas:- breast:0 salivary:-

Gene Information

IDs

Refseq ID NM_199235
Gene ID 78989
Unigene ID -
Probe set ID 219873_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000118004
GTEx ID ENSG00000118004

Orthologous Gene

Mouse[1]  NM_027866
Rat[1]  NM_027866

Chromosomal Region

2p25.3  [3,642,426  -  3,692,048]

Gene Family (Interpro ID)

IPR001304  C-type lectin
IPR016187  C-type lectin fold
IPR016186  C-type lectin-like

Link to Pubmed  (Pubmed ID)

12477932
12975309
17179669
17207965
19724895
19851296
20198315
20237496
20956340
21258343
21664996
21893516
23220946
23954398
24174618

Gene Ontology  (GO ID)

Biological Process

GO:0032502  developmental process
GO:0007275  multicellular organismal development

Cellular Component

GO:0005581  collagen
GO:0005576  extracellular region

Molecular Function

GO:0005537  mannose binding