HLA-B associated transcript 4

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Synonym

HLA-B-associated transcript 4, HLA-B associated transcript 4, D6S54E, G5 protein, Protein BAT4, G5, BAT4

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:17.80 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:148.30 peripheral nerve:- spine:- retina:- eye:58.80 artery/aorta:- vein:- lymphnode:40.40 peripheral blood:36.40 spleen:18.90 thymus:64.40 bone marrow:- adipose:40.30 bone:12.80 skin:19.20
GeneChip nodata
CAGE cerebrum:2.45 cerebellum:- brain stem:2.51 corpus callosum/glia:2.86 pineal gland:2.37 peripheral nerve:- spine:2.42 retina:- eye:- artery/aorta:2.58 vein:2.33 lymphnode:2.58 peripheral blood:- spleen:2.55 thymus:3.77 bone marrow:- adipose:2.59 bone:- skin:-
RNA-seq cerebrum:0 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:18.20 placenta:21.90 prostate:22.50 ovary:74.50 testis:60.60 heart:51.10 muscle:20.10 esophagus:- stomach:- intestine:- colon:33.90     liver/hepato:42.20        lung:29.30    bladder:- kidney:20.80 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:8.90 breast:18.60 salivary:-
GeneChip nodata
CAGE uterus:2.66 placenta:2.85 prostate:2.74 ovary:2.60 testis:3.63 heart:2.60 muscle:2.44 esophagus:2.65 stomach:- intestine:2.80 colon:2.96     liver/hepato:2.50    lung:2.49 bladder:2.52 kidney:2.52 pituitary:2.81 thyroid/parathyroid:2.93 adrenal gland:- pancreas:2.60 breast:2.47 salivary:3.08
RNA-seq uterus:- placenta:- prostate:0 ovary:0 testis:0 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0     liver/hepato:0        lung:0    bladder:- kidney:0 pituitary:- thyroid/parathyroid:0 adrenal gland:0 pancreas:- breast:0 salivary:-

Gene Information

IDs

Refseq ID NM_033177
Gene ID 7918
Unigene ID Hs.247478
Probe set ID -
Ensembl ID ENSG00000204438
GTEx ID ENSG00000204438

Orthologous Gene

Mouse[2]  NM_032460, NM_001128597
Rat[1]  NM_001034157, NM_001128597

Chromosomal Region

HSCHR6_MHC_QBL  [31,619,246  -  31,624,306]
HSCHR6_MHC_COX  [31,616,421  -  31,621,476]
6p21.33  [31,629,006  -  31,634,060]
HSCHR6_MHC_MANN  [31,668,499  -  31,673,553]
HSCHR6_MHC_SSTO  [31,618,946  -  31,624,007]
HSCHR6_MHC_MCF  [31,705,289  -  31,710,343]
HSCHR6_MHC_DBB  [31,611,188  -  31,616,243]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

2813433
2911734
12477932
14574404
14656967
14702039
15489334
16189514
16344560
18029348
18624398
18835879
19115949
19851445
19913121
20453000
20628086
21832049
21963094
22505724
22678362
22990118
24250222

Gene Ontology  (GO ID)

Molecular Function

GO:0003676  nucleic acid binding