ring finger protein 39

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Synonym

LIRF, HZF, HZFW, HZFw1, RNF39, Protein HZFw, ring finger protein 39, RING finger protein 39

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:1.20 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:29.40 artery/aorta:- vein:- lymphnode:- peripheral blood:18.20 spleen:- thymus:- bone marrow:- adipose:- bone:- skin:19.20
GeneChip cerebrum:5.79 cerebellum:5.73 brain stem:5.79 corpus callosum/glia:5.59 pineal gland:- peripheral nerve:5.82 spine:5.88 retina:- eye:- artery/aorta:5.87 vein:5.74 lymphnode:5.70 peripheral blood:- spleen:5.54 thymus:5.26 bone marrow:6.02 adipose:6.05 bone:- skin:6.78
CAGE cerebrum:0.02 cerebellum:- brain stem:0.15 corpus callosum/glia:0.07 pineal gland:0.21 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0.95 vein:0.18 lymphnode:1.16 peripheral blood:- spleen:0 thymus:0.18 bone marrow:- adipose:0.26 bone:- skin:-
RNA-seq cerebrum:0.66 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.14 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.35 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:10.90 prostate:22.50 ovary:- testis:8.70 heart:51.10 muscle:- esophagus:- stomach:- intestine:- colon:8.50     liver/hepato:-        lung:4.90    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:8.90 breast:18.60 salivary:-
GeneChip uterus:5.73 placenta:6.06 prostate:5.97 ovary:5.44 testis:5.67 heart:6.25 muscle:5.95 esophagus:6.81 stomach:6.14 intestine:5.89 colon:5.79 liver/hepato:5.76 lung:5.61 bladder:- kidney:6.08 pituitary:5.87 thyroid/parathyroid:5.45 adrenal gland:5.91 pancreas:5.99 breast:6.56 salivary:6.70
CAGE uterus:1.08 placenta:2.11 prostate:2.09 ovary:0.26 testis:0.52 heart:0 muscle:0 esophagus:3.19 stomach:- intestine:0.21 colon:0.56     liver/hepato:0.14    lung:1.38 bladder:2.00 kidney:0.08 pituitary:0.72 thyroid/parathyroid:0.28 adrenal gland:- pancreas:0.94 breast:1.16 salivary:2.39
RNA-seq uterus:- placenta:- prostate:1.65 ovary:0.38 testis:0.28 heart:0.00 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.10     liver/hepato:0.00        lung:1.25    bladder:- kidney:0.00 pituitary:- thyroid/parathyroid:0.51 adrenal gland:0.36 pancreas:- breast:1.53 salivary:-

Gene Information

IDs

Refseq ID NM_025236
Gene ID 80352
Unigene ID Hs.121178
Probe set ID 219916_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000204618
ENSG00000230332
GTEx ID ENSG00000204618
ENSG00000230332

Orthologous Gene

Mouse[1]  NM_001099632
Rat[1]  NM_134374

Chromosomal Region

HSCHR6_MHC_APD  [29,974,877  -  29,980,498]
HSCHR6_MHC_MANN  [30,033,239  -  30,038,860]
6p22.1  [30,038,043  -  30,043,664]
HSCHR6_MHC_SSTO  [30,027,625  -  30,033,246]
HSCHR6_MHC_MCF  [30,116,544  -  30,122,165]
HSCHR6_MHC_DBB  [30,028,370  -  30,033,991]
HSCHR6_MHC_COX  [30,027,939  -  30,033,560]
HSCHR6_MHC_QBL  [30,027,629  -  30,033,205]

Gene Family (Interpro ID)

IPR001870  B302 (SPRY)-like
IPR003879  Butyrophylin-like
IPR003877  SPla/RYanodine receptor SPRY
IPR018355  SPla/RYanodine receptor subgroup

Link to Pubmed  (Pubmed ID)

8889548
10585558
11006080
11076863
11130983
11716498
12477932
14574404
17719541
19050382
19115949
19693088
19851445
20041166
20593013
20875797

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process

Cellular Component

GO:0005575  cellular_component
GO:0005737  cytoplasm

Molecular Function

GO:0008270  zinc ion binding