tubulin, beta 1

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Synonym

Tubulin beta-1 chain, tubulin, beta 1, TUBB1, dJ543J19.4

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:5.90 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:19.70 adipose:- bone:- skin:4.80
GeneChip cerebrum:4.06 cerebellum:4.23 brain stem:4.16 corpus callosum/glia:3.94 pineal gland:- peripheral nerve:4.14 spine:4.01 retina:- eye:- artery/aorta:4.10 vein:4.15 lymphnode:3.91 peripheral blood:- spleen:3.96 thymus:3.92 bone marrow:4.59 adipose:4.08 bone:- skin:4.33
CAGE cerebrum:0.17 cerebellum:- brain stem:0.17 corpus callosum/glia:0.18 pineal gland:0.36 peripheral nerve:- spine:0.32 retina:- eye:- artery/aorta:0.69 vein:0.79 lymphnode:0.09 peripheral blood:- spleen:2.96 thymus:0 bone marrow:- adipose:0.36 bone:- skin:-
RNA-seq cerebrum:0.36 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.01 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.28 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:67.60 ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:3.95 placenta:4.03 prostate:3.89 ovary:4.02 testis:4.06 heart:3.92 muscle:4.11 esophagus:3.93 stomach:3.94 intestine:3.95 colon:4 liver/hepato:4.05 lung:4.02 bladder:- kidney:3.94 pituitary:4 thyroid/parathyroid:3.97 adrenal gland:3.88 pancreas:4.03 breast:3.92 salivary:4.21
CAGE uterus:0.13 placenta:1.11 prostate:0.21 ovary:0.47 testis:1.95 heart:0.76 muscle:0.17 esophagus:0.09 stomach:- intestine:0 colon:0     liver/hepato:0.46    lung:1.55 bladder:0.33 kidney:0.15 pituitary:0.72 thyroid/parathyroid:0.32 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0.36 ovary:0.63 testis:0.80 heart:0.31 muscle:0.05 esophagus:- stomach:- intestine:- colon:0.22     liver/hepato:0.04        lung:3.49    bladder:- kidney:0.68 pituitary:- thyroid/parathyroid:0.82 adrenal gland:0.88 pancreas:- breast:0.66 salivary:-

Gene Information

IDs

Refseq ID NM_030773
Gene ID 81027
Unigene ID Hs.303023
Probe set ID 208601_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000101162
GTEx ID ENSG00000101162

Orthologous Gene

Mouse[2]  NM_001080971
Rat[2]  NM_001080971

Chromosomal Region

20q13.32  [57,594,309  -  57,601,709]

Gene Family (Interpro ID)

IPR002452  Alpha tubulin
IPR002453  Beta tubulin
IPR002967  Delta tubulin
IPR004057  Epsilon tubulin
IPR002454  Gamma tubulin
IPR000217  Tubulin
IPR003008  Tubulin/FtsZ, GTPase domain

Link to Pubmed  (Pubmed ID)

3782288
10908577
11780052
11790298
12477932
12486001
12665801
12777385
12840015
14583623
15304323
15315966
15331610
15489334
15556606
15691386
15698476
15956286
16095531
16216085
16526095
17488662
17707232
17993481
18029348
18806873
18849486
19074767
19132255
19388931
19805454
19996274
20103599
20191564
20473970
20532885
20639865
20972266
21110914
21145461
21309084
21384078
21890473
21906983
21987572
22139419
22360420
22423221
22505724
22805305
22939629
23000965
23826228
24140708
24244333
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0051084  'de novo' posttranslational protein folding
GO:0044267  cellular protein metabolic process
GO:0006457  protein folding
GO:0051258  protein polymerization
GO:0051225  spindle assembly

Cellular Component

GO:0005737  cytoplasm
GO:0005874  microtubule
GO:0015630  microtubule cytoskeleton
GO:0005886  plasma membrane

Molecular Function

GO:0005525  GTP binding
GO:0003924  GTPase activity
GO:0005200  structural constituent of cytoskeleton