microtubule-associated protein 1 light chain 3 alpha

Synonym

Autophagy-related ubiquitin-like modifier LC3 A, MAP1A/1B light chain 3 A, MAP1LC3A, Autophagy-related protein LC3 A, MAP1ALC3, MAP1BLC3, MAP1 light chain 3-like protein 1, MAP1A/MAP1B LC3 A

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:39.10

cerebellum:25.20

brain stem:-

corpus callosum/glia:-

pineal gland:445

peripheral nerve:-

spine:112.30

retina:-

eye:64.60

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:43.20

GeneChip

nodata

CAGE

cerebrum:5.14

cerebellum:-

brain stem:4.76

corpus callosum/glia:4.38

pineal gland:6.16

peripheral nerve:-

spine:4.77

retina:-

eye:-

artery/aorta:4.38

vein:4.08

lymphnode:3.45

peripheral blood:-

spleen:2.71

thymus:1.95

bone marrow:-

adipose:3.66

bone:-

skin:-

RNA-seq

cerebrum:0.00

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:0.00

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:0.00

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:36.50

placenta:-

prostate:33.80

ovary:37.30

testis:8.70

heart:51.10

muscle:40.20

esophagus:-

stomach:-

intestine:-

colon:50.90

liver/hepato:-

lung:9.80

bladder:-

kidney:10.40

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:8.90

breast:27.90

salivary:-

GeneChip

nodata

CAGE

uterus:3.97

placenta:2.97

prostate:3.94

ovary:3.69

testis:4.23

heart:4.59

muscle:4.05

esophagus:3.69

stomach:-

intestine:4.00

colon:4.29

liver/hepato:3.41

lung:4.07

bladder:4.10

kidney:3.72

pituitary:4.26

thyroid/parathyroid:4.30

adrenal gland:-

pancreas:3.50

breast:4.37

salivary:3.22

RNA-seq

uterus:-

placenta:-

prostate:0.00

ovary:0.00

testis:0.00

heart:0.00

muscle:0.00

esophagus:-

stomach:-

intestine:-

colon:1.71

liver/hepato:0.00

lung:0.14

bladder:-

kidney:0.00

pituitary:-

thyroid/parathyroid:0.56

adrenal gland:0.00

pancreas:-

breast:0.34

salivary:-

IDs

Refseq ID	NM_181509
Gene ID	84557
Unigene ID	Hs.632273
Probe set ID	-
Ensembl ID	ENSG00000101460
GTEx ID	ENSG00000101460

Orthologous Gene

Mouse[1]	NM_025735
Rat [0]

Chromosomal Region

20q11.22 [33,134,658 - 33,148,149]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

Gene Ontology (GO ID)

Biological Process

GO:0000045	autophagic vacuole formation
GO:0000422	mitochondrion degradation

Cellular Component

GO:0005776	autophagic vacuole
GO:0000421	autophagic vacuole membrane
GO:0031410	cytoplasmic vesicle
GO:0005829	cytosol
GO:0012505	endomembrane system
GO:0005770	late endosome
GO:0005874	microtubule
GO:0031090	organelle membrane

Molecular Function

GO:0008429	phosphatidylethanolamine binding
GO:0005543	phospholipid binding
GO:0005515	protein binding

microtubule-associated protein 1 light chain 3 alpha

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function