solute carrier family 22 (organic cation/carnitine transporter), member 16

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Synonym

dJ261K5.1, OCT6, OKB1, FLIPT2, SLC22A16, CT2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:2.40 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:11.80 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:18.90 thymus:- bone marrow:19.70 adipose:- bone:- skin:-
GeneChip nodata
CAGE cerebrum:0.06 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0.09 retina:- eye:- artery/aorta:0.47 vein:0 lymphnode:0.03 peripheral blood:- spleen:0.39 thymus:0.74 bone marrow:- adipose:1.12 bone:- skin:-
RNA-seq cerebrum:0.01 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.06 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.36 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:- prostate:- ovary:- testis:51.90 heart:12.80 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE uterus:0.73 placenta:0.16 prostate:0.08 ovary:0.42 testis:2.98 heart:0.08 muscle:0 esophagus:0 stomach:- intestine:0 colon:0.18     liver/hepato:0.14    lung:0.39 bladder:0 kidney:0.49 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0.36
RNA-seq uterus:- placenta:- prostate:0 ovary:0.33 testis:3.17 heart:0.10 muscle:0 esophagus:- stomach:- intestine:- colon:0.06     liver/hepato:0        lung:0.59    bladder:- kidney:0.07 pituitary:- thyroid/parathyroid:0 adrenal gland:0.11 pancreas:- breast:0.16 salivary:-

Gene Information

IDs

Refseq ID NM_033125
Gene ID 85413
Unigene ID Hs.520319
Probe set ID -
Ensembl ID ENSG00000004809
GTEx ID ENSG00000004809

Orthologous Gene

Mouse[1]  NM_027572
Rat[1]  NM_027572

Chromosomal Region

6q21  [110,745,890  -  110,797,844]

Gene Family (Interpro ID)

IPR020846  Major facilitator superfamily
IPR016196  Major facilitator superfamily, general substrate transporter

Link to Pubmed  (Pubmed ID)

12089149
12372408
12384147
12477932
14702039
15963465
17197897
17473959
17559346
17581421
20037140
20179710
20453000
23503679

Gene Ontology  (GO ID)

Biological Process

GO:0046717  acid secretion
GO:0015837  amine transport
GO:0015879  carnitine transport
GO:0030154  cell differentiation
GO:0007275  multicellular organismal development
GO:0015695  organic cation transport
GO:0007338  single fertilization
GO:0030317  sperm motility
GO:0007283  spermatogenesis
GO:0055085  transmembrane transport

Cellular Component

GO:0016021  integral to membrane
GO:0005886  plasma membrane

Molecular Function

GO:0005275  amine transmembrane transporter activity
GO:0015226  carnitine transporter activity
GO:0015101  organic cation transmembrane transporter activity