scratch homolog 2, zinc finger protein (Drosophila)

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Synonym

Scratch homolog 2 zinc finger protein, SCRT2, Transcriptional repressor scratch 2, FP7030

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:9.50 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:118.60 eye:17.60 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip nodata
CAGE cerebrum:0.11 cerebellum:- brain stem:0.06 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0.09 retina:- eye:- artery/aorta:0 vein:0 lymphnode:0 peripheral blood:- spleen:0.09 thymus:0 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:1.04 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:17.80 breast:- salivary:-
GeneChip nodata
CAGE uterus:0 placenta:0.08 prostate:0 ovary:0 testis:0 heart:0 muscle:0 esophagus:0 stomach:- intestine:0 colon:0     liver/hepato:0    lung:0 bladder:0 kidney:0 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0 ovary:0 testis:0.06 heart:0.01 muscle:0 esophagus:- stomach:- intestine:- colon:0     liver/hepato:0        lung:0    bladder:- kidney:0 pituitary:- thyroid/parathyroid:0 adrenal gland:0.02 pancreas:- breast:0 salivary:-

Gene Information

IDs

Refseq ID NM_033129
Gene ID 85508
Unigene ID Hs.355284
Probe set ID -
Ensembl ID ENSG00000215397
GTEx ID ENSG00000215397

Orthologous Gene

Mouse[1]  NM_001160410
Rat [0]  

Chromosomal Region

20p13  [642,240  -  656,825]

Gene Family (Interpro ID)

IPR015880  Zinc finger, C2H2-like
IPR007087  Zinc finger, C2H2-type

Link to Pubmed  (Pubmed ID)

11274425
11780052

Gene Ontology  (GO ID)

Biological Process

GO:0000122  negative regulation of transcription from RNA polymerase II promoter

Cellular Component

GO:0000790  nuclear chromatin

Molecular Function

GO:0003677  DNA binding
GO:0046872  metal ion binding