SEC22 vesicle trafficking protein homolog C (S. cerevisiae)

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Synonym

DKFZp761F2321, SEC22C, MGC13261, SEC22L3, MGC5373

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:68.70 cerebellum:37.80 brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:- spine:- retina:- eye:76.40 artery/aorta:- vein:- lymphnode:40.40 peripheral blood:54.70 spleen:37.80 thymus:38.70 bone marrow:19.70 adipose:- bone:25.60 skin:91.20
GeneChip nodata
CAGE cerebrum:3.96 cerebellum:- brain stem:4.12 corpus callosum/glia:4.16 pineal gland:3.51 peripheral nerve:- spine:4.31 retina:- eye:- artery/aorta:4.04 vein:3.57 lymphnode:3.41 peripheral blood:- spleen:3.33 thymus:3.19 bone marrow:- adipose:3.77 bone:- skin:-
RNA-seq cerebrum:1.27 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.70 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.46 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:54.70 placenta:65.60 prostate:56.30 ovary:74.50 testis:69.20 heart:76.60 muscle:- esophagus:- stomach:21.20 intestine:64.80 colon:8.50     liver/hepato:10.60        lung:48.90    bladder:- kidney:104 pituitary:- thyroid/parathyroid:- adrenal gland:101.60 pancreas:168.90 breast:65.10 salivary:-
GeneChip nodata
CAGE uterus:3.87 placenta:3.23 prostate:3.70 ovary:3.59 testis:4.11 heart:3.48 muscle:3.10 esophagus:3.48 stomach:- intestine:4.06 colon:3.49     liver/hepato:3.14    lung:3.91 bladder:3.56 kidney:3.58 pituitary:3.81 thyroid/parathyroid:3.47 adrenal gland:- pancreas:3.87 breast:3.73 salivary:3.98
RNA-seq uterus:- placenta:- prostate:2.25 ovary:0.97 testis:3.16 heart:0.47 muscle:0.07 esophagus:- stomach:- intestine:- colon:0.89     liver/hepato:0.69        lung:4.01    bladder:- kidney:0.00 pituitary:- thyroid/parathyroid:1.66 adrenal gland:0.12 pancreas:- breast:1.79 salivary:-

Gene Information

IDs

Refseq ID NM_004206
Gene ID 9117
Unigene ID Hs.445892
Probe set ID -
Ensembl ID ENSG00000093183
GTEx ID ENSG00000093183

Orthologous Gene

Mouse[2]  NM_001164562, NM_178677
Rat[2]  NM_001164562, NM_178677

Chromosomal Region

3p22.1  [42,589,461  -  42,642,572]

Gene Family (Interpro ID)

IPR010908  Longin
IPR011012  Longin-like

Link to Pubmed  (Pubmed ID)

9501016
12477932
12975309
16344560
21963094
24250222

Gene Ontology  (GO ID)

Biological Process

GO:0006888  ER to Golgi vesicle-mediated transport
GO:0015031  protein transport

Cellular Component

GO:0005783  endoplasmic reticulum
GO:0005789  endoplasmic reticulum membrane
GO:0016021  integral to membrane