G protein-coupled receptor 56

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Synonym

BFPP, TM7XN1 protein, TM7LN4, G-protein coupled receptor 56 precursor, DKFZp781L1398, GPR56, G protein-coupled receptor 56, TM7XN1, UNQ540/PRO1083

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:638.80 cerebellum:705.30 brain stem:6535.90 corpus callosum/glia:87.50 pineal gland:- peripheral nerve:61.30 spine:- retina:- eye:117.50 artery/aorta:179.90 vein:466.50 lymphnode:- peripheral blood:127.50 spleen:18.90 thymus:528.20 bone marrow:- adipose:- bone:25.60 skin:201.60
GeneChip cerebrum:6.70 cerebellum:6.36 brain stem:6.78 corpus callosum/glia:6.43 pineal gland:- peripheral nerve:6.66 spine:6.57 retina:- eye:- artery/aorta:6.32 vein:6.40 lymphnode:6.21 peripheral blood:- spleen:6.05 thymus:6.49 bone marrow:6.13 adipose:6.58 bone:- skin:6.70
CAGE cerebrum:5.08 cerebellum:- brain stem:4.94 corpus callosum/glia:5.19 pineal gland:4.11 peripheral nerve:- spine:5.34 retina:- eye:- artery/aorta:3.49 vein:3.39 lymphnode:3.24 peripheral blood:- spleen:1.29 thymus:4.19 bone marrow:- adipose:4.61 bone:- skin:-
RNA-seq cerebrum:0.00 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.96 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:191.40 placenta:357 prostate:101.40 ovary:37.30 testis:731.20 heart:12.80 muscle:- esophagus:- stomach:42.50 intestine:- colon:135.70     liver/hepato:10.60        lung:283.50    bladder:125.60 kidney:187.10 pituitary:- thyroid/parathyroid:1801.20 adrenal gland:- pancreas:133.40 breast:232.30 salivary:328.40
GeneChip uterus:6.24 placenta:6.38 prostate:6.52 ovary:6.19 testis:6.80 heart:6.22 muscle:6.25 esophagus:6.58 stomach:6.25 intestine:6.57 colon:6.46 liver/hepato:5.96 lung:6.26 bladder:- kidney:6.91 pituitary:6.31 thyroid/parathyroid:6.98 adrenal gland:6.07 pancreas:7.09 breast:6.27 salivary:6.94
CAGE uterus:3.79 placenta:4.14 prostate:3.82 ovary:3.12 testis:5.00 heart:3.96 muscle:3.57 esophagus:3.81 stomach:- intestine:2.88 colon:3.44     liver/hepato:1.90    lung:3.31 bladder:3.59 kidney:6.18 pituitary:3.59 thyroid/parathyroid:4.85 adrenal gland:- pancreas:4.95 breast:4.34 salivary:5.04
RNA-seq uterus:- placenta:- prostate:0.19 ovary:0.46 testis:0.21 heart:0.09 muscle:0 esophagus:- stomach:- intestine:- colon:0.14     liver/hepato:0.00        lung:0.00    bladder:- kidney:0.00 pituitary:- thyroid/parathyroid:0.66 adrenal gland:0.00 pancreas:- breast:0.00 salivary:-

Gene Information

IDs

Refseq ID NM_201524
Gene ID 9289
Unigene ID Hs.513633
Probe set ID 206582_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000205336
GTEx ID ENSG00000205336

Orthologous Gene

Mouse[2]  NM_001198894, NM_018882
Rat[1]  NM_152242, NM_018882

Chromosomal Region

16q21  [57,662,419  -  57,698,944]

Gene Family (Interpro ID)

IPR000832  GPCR, family 2, secretin-like
IPR017981  GPCR, family 2-like

Link to Pubmed  (Pubmed ID)

10049584
10100861
11845408
12477932
12975309
15004227
15044805
15340161
15489334
15674329
15916848
16303743
16344560
16757564
17192395
17314516
17932623
18042463
19016831
19525879
19572147
20008459
20301504
20424473
20874003
21349848
21708946
21723461
21724588
21724806
21987572
22238662
23274687
23478665
23902976
24102982
24531968
24561123

Gene Ontology  (GO ID)

Biological Process

GO:0001525  angiogenesis
GO:0007420  brain development
GO:0007155  cell adhesion
GO:0007267  cell-cell signaling
GO:0021801  cerebral cortex radial glia guided migration
GO:0007186  G-protein coupled receptor protein signaling pathway
GO:0021819  layer formation in the cerebral cortex
GO:0008285  negative regulation of cell proliferation
GO:0007218  neuropeptide signaling pathway
GO:0045785  positive regulation of cell adhesion
GO:0035025  positive regulation of Rho protein signal transduction
GO:0070528  protein kinase C signaling cascade
GO:0007266  Rho protein signal transduction
GO:0010573  vascular endothelial growth factor production

Cellular Component

GO:0005576  extracellular region
GO:0016021  integral to membrane
GO:0005887  integral to plasma membrane

Molecular Function

GO:0005518  collagen binding
GO:0050840  extracellular matrix binding
GO:0004930  G-protein coupled receptor activity