CD44 molecule (Indian blood group)

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Synonym

LHR, GP90 lymphocyte homing/adhesion receptor, HUTCH-I, CDW44, CD44 antigen (Indian blood group), Hyaluronate receptor, CD44 antigen precursor, CD44, Hermes antigen, CDw44, Heparan sulfate proteoglycan, Epican, ECMR-III, MGC10468, Extracellular matrix receptor-III, CD44R, PGP-1, MDU2, Phagocytic glycoprotein I, Pgp1, IN, MUTCH-I, MIC4, MDU3, MC56, CD44 molecule (Indian blood group), HCELL

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:106.70 cerebellum:214.10 brain stem:- corpus callosum/glia:1079 pineal gland:- peripheral nerve:214.70 spine:224.60 retina:355.90 eye:235.10 artery/aorta:2487.90 vein:66.60 lymphnode:303.30 peripheral blood:765.20 spleen:264.70 thymus:360.70 bone marrow:393.60 adipose:201.70 bone:1010.80 skin:705.60
GeneChip cerebrum:4.56 cerebellum:4.37 brain stem:4.88 corpus callosum/glia:5.42 pineal gland:- peripheral nerve:5.94 spine:6.95 retina:- eye:- artery/aorta:6.84 vein:7.94 lymphnode:7.33 peripheral blood:- spleen:6.55 thymus:5.81 bone marrow:6.48 adipose:7.23 bone:- skin:8.12
CAGE cerebrum:4.44 cerebellum:- brain stem:5.35 corpus callosum/glia:5.75 pineal gland:4.49 peripheral nerve:- spine:6.86 retina:- eye:- artery/aorta:6.54 vein:6.00 lymphnode:6.36 peripheral blood:- spleen:5.88 thymus:5.20 bone marrow:- adipose:6.22 bone:- skin:-
RNA-seq cerebrum:0 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.30 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.76 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:1512.80 placenta:214.90 prostate:1712.20 ovary:111.80 testis:82.20 heart:242.70 muscle:703.20 esophagus:- stomach:254.90 intestine:129.60 colon:279.80     liver/hepato:2068.90        lung:1158.40    bladder:1884.20 kidney:353.50 pituitary:463.90 thyroid/parathyroid:- adrenal gland:101.60 pancreas:444.60 breast:659.80 salivary:1313.60
GeneChip uterus:7.06 placenta:5.95 prostate:6.23 ovary:5.95 testis:4.12 heart:5.90 muscle:5.11 esophagus:7.60 stomach:6.48 intestine:6.80 colon:6.50 liver/hepato:4.66 lung:7.51 bladder:- kidney:4.63 pituitary:4.05 thyroid/parathyroid:5.83 adrenal gland:4.95 pancreas:7.04 breast:7.63 salivary:8.95
CAGE uterus:6.61 placenta:5.36 prostate:5.92 ovary:5.05 testis:4.22 heart:5.34 muscle:4.45 esophagus:6.34 stomach:- intestine:4.74 colon:5.08     liver/hepato:4.56    lung:6.31 bladder:6.46 kidney:4.23 pituitary:2.87 thyroid/parathyroid:5.30 adrenal gland:- pancreas:6.15 breast:5.74 salivary:7.56
RNA-seq uterus:- placenta:- prostate:2.85 ovary:0.36 testis:0.07 heart:0.20 muscle:0.30 esophagus:- stomach:- intestine:- colon:0.01     liver/hepato:0.03        lung:2.19    bladder:- kidney:0.39 pituitary:- thyroid/parathyroid:3.18 adrenal gland:0.93 pancreas:- breast:1.28 salivary:-

IDs

Refseq ID NM_001001389
Gene ID 960
Unigene ID Hs.502328
Probe set ID 204490_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000026508
GTEx ID ENSG00000026508

Orthologous Gene

Mouse[6]  NM_001039150, NM_001039151, NM_001177785, NM_001177786, NM_001177787, NM_009851
Rat [0]  

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed  (Pubmed ID)

1281868
1465456
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24654937

Gene Ontology  (GO ID)

Biological Process

GO:0060442  branching involved in prostate gland morphogenesis
GO:0001658  branching involved in ureteric bud morphogenesis
GO:0005975  carbohydrate metabolic process
GO:0051216  cartilage development
GO:0016337  cell-cell adhesion
GO:0007160  cell-matrix adhesion
GO:0019221  cytokine-mediated signaling pathway
GO:0030198  extracellular matrix organization
GO:0030203  glycosaminoglycan metabolic process
GO:0002246  healing during inflammatory response
GO:0030214  hyaluronan catabolic process
GO:0030212  hyaluronan metabolic process
GO:0060333  interferon-gamma-mediated signaling pathway
GO:0070487  monocyte aggregation
GO:0043066  negative regulation of apoptosis
GO:0043154  negative regulation of caspase activity
GO:0043518  negative regulation of DNA damage response, signal transduction by p53 class mediator
GO:0070374  positive regulation of ERK1 and ERK2 cascade
GO:0010628  positive regulation of gene expression
GO:0034116  positive regulation of heterotypic cell-cell adhesion
GO:0033138  positive regulation of peptidyl-serine phosphorylation
GO:0050731  positive regulation of peptidyl-tyrosine phosphorylation
GO:0016055  Wnt receptor signaling pathway

Cellular Component

GO:0016323  basolateral plasma membrane
GO:0009986  cell surface
GO:0009897  external side of plasma membrane
GO:0005887  integral to plasma membrane
GO:0005886  plasma membrane

Molecular Function

GO:0005518  collagen binding
GO:0005540  hyaluronic acid binding
GO:0004415  hyalurononglucosaminidase activity
GO:0005515  protein binding
GO:0004888  transmembrane receptor activity