citrate synthase

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Synonym

citrate synthase, 9030605P22Rik, 2610511A05Rik, Cs, Citrate synthase, mitochondrial precursor, Cis

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:369.90 cerebellum:92.10 brain stem:222.50 corpus callosum/glia:- pineal gland:- peripheral nerve:573.30 spine:520.10 retina:257.20 eye:159.60 artery/aorta:421.90 vein:- lymphnode:129.60 peripheral blood:129.40 spleen:250.20 thymus:128.40 bone marrow:205.10 adipose:212.70 bone:250.50 skin:293
GeneChip cerebrum:11.01 cerebellum:10.95 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:11.40 spine:11.07 retina:10.92 eye:10.82 artery/aorta:- vein:10.78 lymphnode:10.66 peripheral blood:- spleen:10.27 thymus:- bone marrow:10.78 adipose:12.20 bone:10.97 skin:11.90
CAGE cerebrum:5.35 cerebellum:- brain stem:5.63 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:5.65 retina:- eye:- artery/aorta:7.42 vein:- lymphnode:4.47 peripheral blood:- spleen:5.06 thymus:4.95 bone marrow:- adipose:- bone:5.49 skin:5.14
RNA-seq cerebrum:48.46 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:349 placenta:276.10 prostate:30.90 ovary:241.30 testis:110.80 heart:1227.70 muscle:355.10 esophagus:- stomach:360 intestine:110.90 colon:158.60     liver/hepato:162.90        lung:241    bladder:132.40 kidney:467.40 pituitary:684.60 thyroid/parathyroid:112.50 adrenal gland:- pancreas:197 breast:192.60 salivary:378
GeneChip uterus:10.87 placenta:10.04 prostate:10.71 ovary:10.81 testis:8.73 heart:13.46 muscle:12.83 esophagus:- stomach:11.62 intestine:12.07 colon:- liver/hepato:9.79 lung:10.09 bladder:11 kidney:11.09 pituitary:9.73 thyroid/parathyroid:- adrenal gland:11.97 pancreas:10.52 breast:11.88 salivary:11.31
CAGE uterus:5.20 placenta:5.08 prostate:5.03 ovary:5.12 testis:4.68 heart:- muscle:- esophagus:- stomach:6.23 intestine:6.80 colon:6.80     liver/hepato:5.26    lung:4.86 bladder:5.37 kidney:- pituitary:4.62 thyroid/parathyroid:- adrenal gland:5.23 pancreas:4.75 breast:6.24 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:62.34 esophagus:- stomach:- intestine:- colon:-     liver/hepato:12.43        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_026444
Gene ID 12974
Unigene ID Mm.58836
Probe set ID 1450667_a_at  [Mouse430_2]
Ensembl ID ENSMUSG00000005683

Orthologous Gene

Human[1]  NM_004077
Rat [0]  

Chromosomal Region

-

Gene Family (Interpro ID)

IPR010109  Citrate synthase, eukaryotic
IPR002020  Citrate synthase-like

Link to Pubmed  (Pubmed ID)

8833235
8889548
10349636
10922068
11042159
11076861
11172053
11217851
12466851
12477932
12520002
12904583
14610273
14651853
14681479
15489334
15809022
16141072
16141073
16751257
17626619
18280008
18614015
18729827
18799693
19767529
20716647
21677750
21803452
22569253

Gene Ontology  (GO ID)

Biological Process

GO:0006084  acetyl-CoA metabolic process
GO:0005975  carbohydrate metabolic process
GO:0044262  cellular carbohydrate metabolic process
GO:0006101  citrate metabolic process
GO:0008152  metabolic process
GO:0006107  oxaloacetate metabolic process
GO:0006099  tricarboxylic acid cycle

Cellular Component

GO:0005759  mitochondrial matrix
GO:0005739  mitochondrion

Molecular Function

GO:0004108  citrate (Si)-synthase activity
GO:0016740  transferase activity
GO:0046912  transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer