sorting nexin 18

 jump to detail

Synonym

Snx18, Snag1, Sorting nexin-associated Golgi protein 1, Sorting nexin-18, sorting nexin associated golgi protein 1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:20.80 cerebellum:73.70 brain stem:31.80 corpus callosum/glia:- pineal gland:- peripheral nerve:95.50 spine:47.30 retina:- eye:68.40 artery/aorta:168.80 vein:- lymphnode:129.60 peripheral blood:57.50 spleen:52.70 thymus:118.60 bone marrow:102.60 adipose:- bone:100.20 skin:47.50
GeneChip cerebrum:7.71 cerebellum:7.73 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:8.29 spine:8.04 retina:8.62 eye:8.89 artery/aorta:- vein:9.95 lymphnode:9.52 peripheral blood:- spleen:9.26 thymus:- bone marrow:9.13 adipose:8.12 bone:9.39 skin:9.01
CAGE cerebrum:3.04 cerebellum:- brain stem:2.98 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:3.16 retina:- eye:- artery/aorta:3.55 vein:- lymphnode:2.17 peripheral blood:- spleen:3.40 thymus:3.19 bone marrow:- adipose:- bone:4.18 skin:3.41
RNA-seq cerebrum:1.99 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:55.20 prostate:- ovary:137.90 testis:29.60 heart:111.60 muscle:106.50 esophagus:- stomach:- intestine:- colon:-     liver/hepato:18.10        lung:80.30    bladder:132.40 kidney:104.80 pituitary:64.60 thyroid/parathyroid:- adrenal gland:424.40 pancreas:28.10 breast:45.70 salivary:54
GeneChip uterus:9.21 placenta:8.95 prostate:8.29 ovary:9.61 testis:6.41 heart:7.90 muscle:7.82 esophagus:- stomach:8.57 intestine:8.03 colon:- liver/hepato:7.96 lung:9.28 bladder:9.22 kidney:8.70 pituitary:7.69 thyroid/parathyroid:- adrenal gland:8.40 pancreas:8.26 breast:8.55 salivary:8.46
CAGE uterus:3.60 placenta:3.57 prostate:2.35 ovary:3.99 testis:2.25 heart:- muscle:- esophagus:- stomach:3.45 intestine:3.40 colon:3.39     liver/hepato:3.11    lung:3.73 bladder:3.93 kidney:- pituitary:2.53 thyroid/parathyroid:- adrenal gland:3.09 pancreas:3.89 breast:3.62 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.70 esophagus:- stomach:- intestine:- colon:-     liver/hepato:1.97        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_130796
Gene ID 170625
Unigene ID Mm.33721
Probe set ID 1416359_at  [Mouse430_2]
Ensembl ID ENSMUSG00000042364

Orthologous Gene

Human[6]  NM_001102575, NM_001145427, NM_052870
Rat[1]  NM_001107652, NM_001145427, NM_052870

Chromosomal Region

-

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8889548
10349636
11042159
11076861
11217851
12466851
12477932
12904583
14610273
15747579
15782199
16141072
16141073
17761170
17967808
18799693
21267068
21339182
24457600

Gene Ontology  (GO ID)

Biological Process

GO:0007154  cell communication
GO:0006897  endocytosis
GO:0043547  positive regulation of GTPase activity
GO:0015031  protein transport
GO:0006810  transport

Cellular Component

GO:0043025  cell soma
GO:0030136  clathrin-coated vesicle
GO:0005768  endosome
GO:0031234  extrinsic to internal side of plasma membrane
GO:0030426  growth cone
GO:0016020  membrane
GO:0005886  plasma membrane

Molecular Function

GO:0008289  lipid binding
GO:0035091  phosphoinositide binding
GO:0005515  protein binding