myogenic differentiation 1

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Synonym

Myoblast determination protein 1, MyoD, AI503393, myogenic differentiation 1, Myod, MYF3, Myod-1, Myod1

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:4.20 cerebellum:4.44 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:4.20 spine:4.34 retina:4.13 eye:4.59 artery/aorta:- vein:4.50 lymphnode:4.20 peripheral blood:- spleen:4.26 thymus:- bone marrow:4.04 adipose:4.68 bone:4.42 skin:4.64
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:0.55 retina:- eye:- artery/aorta:0 vein:- lymphnode:0 peripheral blood:- spleen:0 thymus:0 bone marrow:- adipose:- bone:2.09 skin:1.03
RNA-seq cerebrum:0.79 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:4.16 placenta:4.21 prostate:4.28 ovary:4 testis:4.43 heart:4.54 muscle:7.51 esophagus:- stomach:4.34 intestine:4.26 colon:- liver/hepato:4.52 lung:4.11 bladder:4.09 kidney:4.22 pituitary:4.49 thyroid/parathyroid:- adrenal gland:4.29 pancreas:4.59 breast:5.58 salivary:4.33
CAGE uterus:0 placenta:0 prostate:0.20 ovary:0 testis:0 heart:- muscle:- esophagus:- stomach:0 intestine:0 colon:0     liver/hepato:0    lung:0 bladder:0 kidney:- pituitary:0 thyroid/parathyroid:- adrenal gland:0 pancreas:0 breast:0.22 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:2.14 esophagus:- stomach:- intestine:- colon:-     liver/hepato:0        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

IDs

Refseq ID NM_010866
Gene ID 17927
Unigene ID -
Probe set ID 1418420_at  [Mouse430_2]
Ensembl ID ENSMUSG00000009471

Orthologous Gene

Human[1]  NM_002478
Rat [0]  

Chromosomal Region

-

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

1303276
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1347472
1348494
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24472550

Gene Ontology  (GO ID)

Biological Process

GO:0055007  cardiac muscle cell differentiation
GO:0030154  cell differentiation
GO:0071385  cellular response to glucocorticoid stimulus
GO:0071453  cellular response to oxygen levels
GO:0009267  cellular response to starvation
GO:0007275  multicellular organismal development
GO:0007517  muscle organ development
GO:0007518  myoblast cell fate determination
GO:0045445  myoblast differentiation
GO:0014904  myotube cell development
GO:0014908  myotube differentiation involved in skeletal muscle regeneration
GO:0051149  positive regulation of muscle cell differentiation
GO:0043415  positive regulation of skeletal muscle tissue regeneration
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0045893  positive regulation of transcription, DNA-dependent
GO:0000381  regulation of alternative nuclear mRNA splicing, via spliceosome
GO:0043484  regulation of RNA splicing
GO:0006357  regulation of transcription from RNA polymerase II promoter
GO:0006355  regulation of transcription, DNA-dependent
GO:0043503  skeletal muscle fiber adaptation
GO:0048741  skeletal muscle fiber development
GO:0007519  skeletal muscle tissue development
GO:0051146  striated muscle cell differentiation
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005737  cytoplasm
GO:0030016  myofibril
GO:0000790  nuclear chromatin
GO:0005634  nucleus
GO:0005667  transcription factor complex

Molecular Function

GO:0003677  DNA binding
GO:0019899  enzyme binding
GO:0005515  protein binding
GO:0046983  protein dimerization activity
GO:0046982  protein heterodimerization activity
GO:0003705  RNA polymerase II transcription factor activity, enhancer binding
GO:0003700  transcription factor activity
GO:0008134  transcription factor binding
GO:0031625  ubiquitin protein ligase binding