S100 calcium binding protein A11 (calgizzarin)

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Synonym

Emap1, EMAP, cal, Endothelial monocyte-activating polypeptide, S100c, S100 calcium-binding protein A11, calgizzarin, Calgizzarin, S100 calcium binding protein A11 (calizzarin), Protein S100C, S100a14, S100a11, Protein S100-A11, MGC107585, EMAPI

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:10.40 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:38.20 spine:- retina:- eye:60.80 artery/aorta:- vein:- lymphnode:32.40 peripheral blood:- spleen:13.20 thymus:- bone marrow:- adipose:- bone:50.10 skin:166.30
GeneChip cerebrum:7.40 cerebellum:7.95 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:10.36 spine:7.89 retina:7.36 eye:11.04 artery/aorta:- vein:13.33 lymphnode:11.86 peripheral blood:- spleen:11.77 thymus:- bone marrow:12.88 adipose:12.21 bone:12.78 skin:12.74
CAGE nodata
RNA-seq cerebrum:7.23 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:69 prostate:185.30 ovary:- testis:96.10 heart:37.20 muscle:355.10 esophagus:- stomach:196.40 intestine:- colon:141     liver/hepato:9.10        lung:10    bladder:- kidney:104.80 pituitary:103.30 thyroid/parathyroid:1687.10 adrenal gland:- pancreas:37.50 breast:19.60 salivary:108
GeneChip uterus:12.83 placenta:12.64 prostate:11.86 ovary:12.38 testis:8.05 heart:10.07 muscle:10.10 esophagus:- stomach:12.10 intestine:11.34 colon:- liver/hepato:7.88 lung:12.91 bladder:12.83 kidney:11.27 pituitary:11.37 thyroid/parathyroid:- adrenal gland:10.78 pancreas:9.70 breast:11.88 salivary:11.56
CAGE nodata
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:10.37 esophagus:- stomach:- intestine:- colon:-     liver/hepato:4.06        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_016740
Gene ID 20195
Unigene ID Mm.280038
Probe set ID 1460351_at  [Mouse430_2]
Ensembl ID ENSMUSG00000027907

Orthologous Gene

Human[1]  NM_005620
Rat[1]  NM_001004095

Chromosomal Region

-

Gene Family (Interpro ID)

IPR002048  Calcium-binding EF-hand
IPR018249  EF-HAND 2

Link to Pubmed  (Pubmed ID)

7929199
9599666
9920416
10349636
10395934
10497345
10586937
11042159
11076861
11217851
12466851
12477932
14579419
14610273
14743444
15203200
15336958
15489334
16141072
16141073
16602821
16938360
18523305
18554416
18799693
18973680
21254279
21267068
21565611
21677750
22869607

Gene Ontology  (GO ID)

Biological Process

GO:0007283  spermatogenesis

Cellular Component

GO:0005737  cytoplasm
GO:0005634  nucleus
GO:0001726  ruffle

Molecular Function

GO:0005509  calcium ion binding
GO:0048306  calcium-dependent protein binding
GO:0046872  metal ion binding
GO:0042803  protein homodimerization activity