splicing factor 3a, subunit 2

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Synonym

splicing factor 3a, subunit 2, SAP 62, SFA66, Splicing factor 3A subunit 2, 66kDa, SF3a66, PRP11, Spliceosome-associated protein 62, Sf3a2, Sap62

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:20.80 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:32.10 eye:22.80 artery/aorta:- vein:- lymphnode:- peripheral blood:14.40 spleen:- thymus:- bone marrow:- adipose:- bone:12.50 skin:7.90
GeneChip cerebrum:9.33 cerebellum:9.56 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:9.07 spine:9.20 retina:10.06 eye:10.20 artery/aorta:- vein:9.46 lymphnode:10.08 peripheral blood:- spleen:10.47 thymus:- bone marrow:10.18 adipose:9.36 bone:9.73 skin:9.13
CAGE cerebrum:4.20 cerebellum:- brain stem:4.03 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:3.94 retina:- eye:- artery/aorta:4.03 vein:- lymphnode:4.56 peripheral blood:- spleen:4.47 thymus:4.51 bone marrow:- adipose:- bone:4.64 skin:4.19
RNA-seq cerebrum:12.99 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:43.60 placenta:- prostate:- ovary:34.50 testis:7.40 heart:37.20 muscle:- esophagus:- stomach:- intestine:- colon:17.60     liver/hepato:36.20        lung:70.30    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:93.80 breast:35.90 salivary:108
GeneChip uterus:9.94 placenta:9.17 prostate:9.60 ovary:10.12 testis:9.84 heart:9.75 muscle:9.67 esophagus:- stomach:9.34 intestine:9.64 colon:- liver/hepato:9.11 lung:9.60 bladder:9.54 kidney:8.89 pituitary:9.64 thyroid/parathyroid:- adrenal gland:9.78 pancreas:9.47 breast:9.77 salivary:9.52
CAGE uterus:4.14 placenta:3.87 prostate:3.59 ovary:4.36 testis:4.88 heart:- muscle:- esophagus:- stomach:4.43 intestine:4.13 colon:3.99     liver/hepato:3.69    lung:4.10 bladder:4.06 kidney:- pituitary:4.02 thyroid/parathyroid:- adrenal gland:4.00 pancreas:3.80 breast:3.91 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:6.92 esophagus:- stomach:- intestine:- colon:-     liver/hepato:4.67        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_013651
Gene ID 20222
Unigene ID Mm.358633
Probe set ID 1455546_s_at  [Mouse430_2]
Ensembl ID ENSMUSG00000020211

Orthologous Gene

Human[2]  NM_007165
Rat[1]  NM_001011986

Chromosomal Region

-

Gene Family (Interpro ID)

IPR000690  Zinc finger, C2H2-type matrin
IPR003604  Zinc finger, U1-type

Link to Pubmed  (Pubmed ID)

8541848
8630494
8889548
8948595
10922068
10984455
11602354
12477932
12520002
12904583
14610273
15618518
16602821
17967808
18287559
18559850
18799693
19324890
21677750
22083510

Gene Ontology  (GO ID)

Biological Process

GO:0006397  mRNA processing
GO:0000398  nuclear mRNA splicing, via spliceosome
GO:0000375  RNA splicing, via transesterification reactions

Cellular Component

GO:0071013  catalytic step 2 spliceosome
GO:0005634  nucleus
GO:0005681  spliceosomal complex

Molecular Function

GO:0046872  metal ion binding
GO:0005515  protein binding