spermatid perinuclear RNA binding protein

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Synonym

spermatid perinuclear RNA binding protein, Spnr, C86322, Strbp

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:8.96 cerebellum:8.61 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:9.06 spine:8.36 retina:9.48 eye:8.78 artery/aorta:- vein:8.13 lymphnode:9.21 peripheral blood:- spleen:9.19 thymus:- bone marrow:8.67 adipose:7.84 bone:8.80 skin:7.76
CAGE cerebrum:4.92 cerebellum:- brain stem:4.80 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:4.73 retina:- eye:- artery/aorta:3.34 vein:- lymphnode:4.78 peripheral blood:- spleen:3.95 thymus:4.75 bone marrow:- adipose:- bone:3.66 skin:3.95
RNA-seq cerebrum:4.88 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:8.09 placenta:7.63 prostate:9.21 ovary:8.80 testis:10.01 heart:6.90 muscle:8.45 esophagus:- stomach:9.33 intestine:9.59 colon:- liver/hepato:8.51 lung:7.73 bladder:8.17 kidney:8.79 pituitary:9.45 thyroid/parathyroid:- adrenal gland:8.16 pancreas:8.82 breast:8.17 salivary:9.68
CAGE uterus:3.57 placenta:3.21 prostate:4.74 ovary:4.14 testis:5.97 heart:- muscle:- esophagus:- stomach:4.10 intestine:4.15 colon:3.99     liver/hepato:3.93    lung:3.79 bladder:3.34 kidney:- pituitary:4.34 thyroid/parathyroid:- adrenal gland:3.22 pancreas:4.21 breast:3.74 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:3.73 esophagus:- stomach:- intestine:- colon:-     liver/hepato:4.51        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_009261
Gene ID 20744
Unigene ID -
Probe set ID 1452061_s_at  [Mouse430_2]
Ensembl ID ENSMUSG00000026915

Orthologous Gene

Human[2]  NM_001171137, NM_018387
Rat[2]  NM_053416, NM_018387

Chromosomal Region

2B  [37,338,748  -  37,559,379]

Gene Family (Interpro ID)

IPR001159  Double-stranded RNA binding
IPR014720  Double-stranded RNA-binding-like

Link to Pubmed  (Pubmed ID)

7744952
8889548
9626495
9674995
10349636
10725249
10922068
11042159
11076861
11125038
11217851
11336498
12466851
12477932
12520002
12904583
14610273
15489334
15741177
15782199
16033648
16141072
16141073
16778019
17967808
18799693
21267068
22922362

Gene Ontology  (GO ID)

Biological Process

GO:0030154  cell differentiation
GO:0006928  cellular component movement
GO:0007638  mechanosensory behavior
GO:0007275  multicellular organismal development
GO:0007286  spermatid development
GO:0007283  spermatogenesis

Cellular Component

GO:0005737  cytoplasm
GO:0005856  cytoskeleton
GO:0015630  microtubule cytoskeleton
GO:0005634  nucleus

Molecular Function

GO:0003677  DNA binding
GO:0003725  double-stranded RNA binding
GO:0003723  RNA binding
GO:0003727  single-stranded RNA binding