transgelin 2

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Synonym

2700094C18Rik, KIAA0120, Sm22B, Transgelin-2, transgelin 2, SM22beta, Sm22a, Tagln2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:39.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:257.80 peripheral nerve:133.80 spine:- retina:- eye:15.20 artery/aorta:- vein:- lymphnode:108 peripheral blood:143.80 spleen:13.20 thymus:19.80 bone marrow:615.40 adipose:- bone:275.50 skin:110.80
GeneChip cerebrum:6.59 cerebellum:6.45 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:8.97 spine:7.02 retina:6.60 eye:7.77 artery/aorta:- vein:9.32 lymphnode:9.85 peripheral blood:- spleen:9.49 thymus:- bone marrow:9.72 adipose:8.58 bone:9.26 skin:8.69
CAGE cerebrum:3.22 cerebellum:- brain stem:3.69 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:3.87 retina:- eye:- artery/aorta:6.21 vein:- lymphnode:6.83 peripheral blood:- spleen:5.93 thymus:5.47 bone marrow:- adipose:- bone:6.57 skin:6.23
RNA-seq cerebrum:4.35 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:174.50 placenta:248.50 prostate:61.80 ovary:- testis:29.60 heart:111.60 muscle:319.60 esophagus:- stomach:556.40 intestine:73.90 colon:581.50     liver/hepato:27.20        lung:200.80    bladder:132.40 kidney:209.50 pituitary:25.80 thyroid/parathyroid:899.80 adrenal gland:- pancreas:46.90 breast:306.90 salivary:54
GeneChip uterus:9.51 placenta:10.67 prostate:8.26 ovary:8.95 testis:6.47 heart:8.53 muscle:7.66 esophagus:- stomach:10.96 intestine:10.05 colon:- liver/hepato:7.40 lung:10.61 bladder:8.53 kidney:8.85 pituitary:7.51 thyroid/parathyroid:- adrenal gland:7.84 pancreas:8.24 breast:8.64 salivary:8.36
CAGE uterus:6.35 placenta:7.01 prostate:5.68 ovary:5.76 testis:2.19 heart:- muscle:- esophagus:- stomach:8.14 intestine:6.04 colon:6.32     liver/hepato:4.62    lung:7.06 bladder:5.52 kidney:- pituitary:4.25 thyroid/parathyroid:- adrenal gland:5.14 pancreas:5.27 breast:4.98 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:6.65 esophagus:- stomach:- intestine:- colon:-     liver/hepato:3.52        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_178598
Gene ID 21346
Unigene ID Mm.271711
Probe set ID 1426529_a_at  [Mouse430_2]
Ensembl ID ENSMUSG00000026547

Orthologous Gene

Human[2]  NM_003564
Rat[1]  NM_001013127

Chromosomal Region

-

Gene Family (Interpro ID)

IPR016146  Calponin-homology
IPR001715  Calponin-like actin-binding
IPR003096  SM22/calponin

Link to Pubmed  (Pubmed ID)

8889548
9693045
10051400
10349636
10922068
11042159
11076861
11217851
11401431
11431695
11990753
12049783
12466851
12477932
14610273
15368895
15782199
16141072
16141073
16511601
18270576
18799693
19015276
20230754
20499380
21267068

Gene Ontology  (GO ID)

Biological Process

GO:0007517  muscle organ development