lin-7 homolog C (C. elegans)

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Synonym

LIN-7C, mLin7C, Vertebrate lin-7 homolog 3, Mammalian lin-seven protein 3, AI303698, AW125731, D2Ertd520e, lin-7 homolog C (C. elegans), 9130007B12Rik, Lin-7C, Lin7c, AU019331, MGC54626, Veli-3 protein, Mals3, MALS-3, Veli3, Lin-7 homolog C, LIN-7-C

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:140.70 cerebellum:184.20 brain stem:63.60 corpus callosum/glia:- pineal gland:- peripheral nerve:38.20 spine:47.30 retina:32.10 eye:136.80 artery/aorta:- vein:- lymphnode:97.20 peripheral blood:14.40 spleen:26.30 thymus:118.60 bone marrow:102.60 adipose:- bone:25 skin:142.50
GeneChip cerebrum:9.14 cerebellum:9.73 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:8.26 spine:8.38 retina:8.40 eye:8.12 artery/aorta:- vein:8.70 lymphnode:8.86 peripheral blood:- spleen:8.54 thymus:- bone marrow:8.74 adipose:8.72 bone:8.73 skin:8.97
CAGE cerebrum:4.91 cerebellum:- brain stem:4.28 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:4.42 retina:- eye:- artery/aorta:4.36 vein:- lymphnode:4.58 peripheral blood:- spleen:3.67 thymus:4.56 bone marrow:- adipose:- bone:4.29 skin:4.64
RNA-seq cerebrum:2.09 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:43.60 placenta:124.30 prostate:185.30 ovary:160.90 testis:118.20 heart:167.40 muscle:- esophagus:- stomach:163.60 intestine:37 colon:123.40     liver/hepato:108.60        lung:40.20    bladder:66.20 kidney:104.80 pituitary:361.70 thyroid/parathyroid:- adrenal gland:- pancreas:234.60 breast:114.30 salivary:-
GeneChip uterus:8.78 placenta:9.07 prostate:9.65 ovary:8.88 testis:7.38 heart:8.24 muscle:8.16 esophagus:- stomach:9.80 intestine:9.97 colon:- liver/hepato:8.65 lung:9.17 bladder:9.08 kidney:9.22 pituitary:9.85 thyroid/parathyroid:- adrenal gland:8.57 pancreas:8.17 breast:8.97 salivary:7.39
CAGE uterus:4.62 placenta:4.43 prostate:4.59 ovary:4.42 testis:4.94 heart:- muscle:- esophagus:- stomach:4.60 intestine:4.77 colon:4.74     liver/hepato:4.67    lung:4.69 bladder:4.49 kidney:- pituitary:5.20 thyroid/parathyroid:- adrenal gland:4.57 pancreas:4.30 breast:4.69 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:2.76 esophagus:- stomach:- intestine:- colon:-     liver/hepato:2.62        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_011699
Gene ID 22343
Unigene ID Mm.235300
Probe set ID 1423322_at  [Mouse430_2]
Ensembl ID ENSMUSG00000027162

Orthologous Gene

Human[4]  NM_018362
Rat [0]  

Chromosomal Region

-

Gene Family (Interpro ID)

IPR004172  L27

Link to Pubmed  (Pubmed ID)

8889548
9753324
9822620
10341223
10349636
10725249
10753959
10846156
10922068
11042159
11076861
11104771
11217851
11865057
12351654
12466851
12477932
12520002
14610273
14960569
15558731
15863617
16141072
16141073
16186258
16192269
16512683
16520334
16602821
16822657
17012742
17923534
18403412
19423573
19474196
19726564
21145499
21460039
21677750
22767515

Gene Ontology  (GO ID)

Biological Process

GO:0006887  exocytosis
GO:0007269  neurotransmitter secretion
GO:0015031  protein transport
GO:0006810  transport

Cellular Component

GO:0030054  cell junction
GO:0005911  cell-cell junction
GO:0016020  membrane
GO:0043005  neuron projection
GO:0005886  plasma membrane
GO:0045211  postsynaptic membrane
GO:0045202  synapse
GO:0005923  tight junction

Molecular Function

GO:0008092  cytoskeletal protein binding
GO:0030165  PDZ domain binding
GO:0005515  protein binding
GO:0019904  protein domain specific binding