rabphilin 3A-like (without C2 domains)

 jump to detail

Synonym

rabphilin 3A-like (without C2 domains), Rph3al, Noc2, Gm1753, 6530413F01Rik

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:3.50 cerebellum:18.40 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip nodata
CAGE cerebrum:0.18 cerebellum:- brain stem:0.23 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:0.44 retina:- eye:- artery/aorta:0.83 vein:- lymphnode:0.71 peripheral blood:- spleen:1.06 thymus:0 bone marrow:- adipose:- bone:1.02 skin:0
RNA-seq cerebrum:1.00 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:149.40 testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:40.20    bladder:- kidney:8.10 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:46.90 breast:16.30 salivary:54
GeneChip nodata
CAGE uterus:2.71 placenta:0.10 prostate:0.51 ovary:2.48 testis:0.75 heart:- muscle:- esophagus:- stomach:3.72 intestine:1.36 colon:2.19     liver/hepato:0.47    lung:2.58 bladder:0.68 kidney:- pituitary:4.38 thyroid/parathyroid:- adrenal gland:1.85 pancreas:3.71 breast:1.93 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:2.02 esophagus:- stomach:- intestine:- colon:-     liver/hepato:2.46        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_029548
Gene ID 380714
Unigene ID Mm.425697
Probe set ID -
Ensembl ID ENSMUSG00000020847

Orthologous Gene

Human[1]  NM_001190411, NM_001190412, NM_001190413, NM_006987
Rat[1]  NM_133591, NM_001190412, NM_001190413, NM_006987

Chromosomal Region

11B5  [75,644,501  -  75,751,931]

Gene Family (Interpro ID)

IPR010911  Rab-binding domain
IPR011011  Zinc finger, FYVE/PHD-type
IPR013083  Zinc finger, RING/FYVE/PHD-type

Link to Pubmed  (Pubmed ID)

10349636
11042159
11076861
11217851
12466851
12477932
12578829
14722103
15159548
15489334
16141072
16141073
16835753
21267068
21677750
22615885

Gene Ontology  (GO ID)

Biological Process

GO:0006887  exocytosis
GO:0042593  glucose homeostasis
GO:0006886  intracellular protein transport
GO:0045744  negative regulation of G-protein coupled receptor protein signaling pathway
GO:0050714  positive regulation of protein secretion
GO:0017158  regulation of calcium ion-dependent exocytosis

Cellular Component

GO:0005737  cytoplasm
GO:0031410  cytoplasmic vesicle
GO:0016020  membrane
GO:0030141  secretory granule
GO:0030667  secretory granule membrane

Molecular Function

GO:0030274  LIM domain binding
GO:0046872  metal ion binding
GO:0005515  protein binding
GO:0017137  Rab GTPase binding