synaptotagmin IX

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Synonym

synaptotagmin IX, Synaptotagmin V, Syt9, Syt5, Synaptotagmin IX, Sytv, SytIX, Synaptotagmin-9

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:15.60 cerebellum:73.70 brain stem:31.80 corpus callosum/glia:- pineal gland:257.80 peripheral nerve:76.40 spine:- retina:32.10 eye:76 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:26.30 thymus:- bone marrow:- adipose:- bone:- skin:55.40
GeneChip cerebrum:6.85 cerebellum:8.68 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:10.20 spine:6.11 retina:8.54 eye:7.69 artery/aorta:- vein:4.50 lymphnode:4.28 peripheral blood:- spleen:4.23 thymus:- bone marrow:4.15 adipose:4.39 bone:4.51 skin:4.30
CAGE cerebrum:2.32 cerebellum:- brain stem:2.62 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:1.38 retina:- eye:- artery/aorta:0.46 vein:- lymphnode:0 peripheral blood:- spleen:0 thymus:0.27 bone marrow:- adipose:- bone:0 skin:0
RNA-seq cerebrum:3.97 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:11.50 testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:8.10 pituitary:77.50 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:13.10 salivary:-
GeneChip uterus:4.57 placenta:4.37 prostate:4.38 ovary:4.45 testis:4.76 heart:4.45 muscle:4.36 esophagus:- stomach:4.56 intestine:4.41 colon:- liver/hepato:4.73 lung:4.61 bladder:4.19 kidney:4.38 pituitary:7.88 thyroid/parathyroid:- adrenal gland:5.06 pancreas:4.67 breast:5.33 salivary:5.12
CAGE uterus:0.90 placenta:0.62 prostate:0.74 ovary:0.54 testis:0.99 heart:- muscle:- esophagus:- stomach:0.67 intestine:0.42 colon:0.23     liver/hepato:0.64    lung:0.31 bladder:0.86 kidney:- pituitary:2.56 thyroid/parathyroid:- adrenal gland:1.22 pancreas:0 breast:2.68 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:1.68        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_021889
Gene ID 60510
Unigene ID Mm.302793
Probe set ID 1423258_at  [Mouse430_2]
Ensembl ID ENSMUSG00000062542

Orthologous Gene

Human[1]  NM_175733
Rat [0]  

Chromosomal Region

-

Gene Family (Interpro ID)

IPR000008  C2 calcium-dependent membrane targeting
IPR008973  C2 calcium/lipid-binding domain, CaLB
IPR018029  C2 membrane targeting protein

Link to Pubmed  (Pubmed ID)

8889548
10349636
10531343
11042159
11076861
11125038
11217851
12466851
12477932
15350218
16141072
16141073
16284245
16407767
16602821
17431699
17521570
19906978
20847230
21085706
21267068
21677750

Gene Ontology  (GO ID)

Biological Process

GO:0045956  positive regulation of calcium ion-dependent exocytosis
GO:0017158  regulation of calcium ion-dependent exocytosis
GO:0050796  regulation of insulin secretion
GO:0006810  transport

Cellular Component

GO:0030054  cell junction
GO:0031410  cytoplasmic vesicle
GO:0031045  dense core granule
GO:0016021  integral to membrane
GO:0016020  membrane
GO:0030141  secretory granule
GO:0030667  secretory granule membrane
GO:0045202  synapse
GO:0008021  synaptic vesicle

Molecular Function

GO:0042802  identical protein binding
GO:0046872  metal ion binding
GO:0005515  protein binding
GO:0005215  transporter activity