RIKEN cDNA 2400001E08 gene

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Synonym

RIKEN cDNA 2400001E08 gene, 2400001E08Rik, MGC144254, MGC144253, MGC102412

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:10.40 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:64.30 eye:7.60 artery/aorta:- vein:- lymphnode:10.80 peripheral blood:- spleen:- thymus:9.90 bone marrow:- adipose:- bone:- skin:15.80
GeneChip cerebrum:11.22 cerebellum:10.90 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:11.49 spine:11.23 retina:11.25 eye:11.37 artery/aorta:- vein:11.38 lymphnode:11.41 peripheral blood:- spleen:11.15 thymus:- bone marrow:11.38 adipose:12.01 bone:11.62 skin:11.40
CAGE cerebrum:4.16 cerebellum:- brain stem:4.38 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:4.43 retina:- eye:- artery/aorta:4.45 vein:- lymphnode:3.99 peripheral blood:- spleen:4.17 thymus:3.79 bone marrow:- adipose:- bone:4.18 skin:4.17
RNA-seq cerebrum:23.45 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:43.60 placenta:- prostate:- ovary:11.50 testis:- heart:18.60 muscle:35.50 esophagus:- stomach:- intestine:- colon:-     liver/hepato:9.10        lung:80.30    bladder:- kidney:8.10 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:18.80 breast:39.20 salivary:-
GeneChip uterus:11.36 placenta:11.69 prostate:11.10 ovary:11.33 testis:9.57 heart:12 muscle:10.98 esophagus:- stomach:11.40 intestine:11.21 colon:- liver/hepato:11.11 lung:11.13 bladder:11.20 kidney:11.69 pituitary:11.67 thyroid/parathyroid:- adrenal gland:11.62 pancreas:10.72 breast:11.54 salivary:11.38
CAGE uterus:4.16 placenta:4.69 prostate:4.19 ovary:4.01 testis:3.47 heart:- muscle:- esophagus:- stomach:4.72 intestine:4.41 colon:4.43     liver/hepato:4.53    lung:4.14 bladder:4.21 kidney:- pituitary:3.99 thyroid/parathyroid:- adrenal gland:4.25 pancreas:3.83 breast:4.44 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:24.04 esophagus:- stomach:- intestine:- colon:-     liver/hepato:15.03        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_025605
Gene ID 66508
Unigene ID Mm.359278
Probe set ID 1417463_a_at  [Mouse430_2]
Ensembl ID ENSMUSG00000030842

Orthologous Gene

Human[1]  NM_017907
Rat [0]  

Chromosomal Region

-

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8889548
10349636
10922068
11042159
11076861
11125038
11217851
12466851
12477932
12520002
14610273
15345747
15489334
15782199
16141072
16141073
17967808
18799693
19177150
21087931
21267068
21452851
21677750
22227194
23781028
24457600

Gene Ontology  (GO ID)

Biological Process

GO:0016049  cell growth
GO:0034613  cellular protein localization
GO:0071230  cellular response to amino acid stimulus
GO:0042632  cholesterol homeostasis
GO:0032439  endosome localization
GO:0007032  endosome organization
GO:0032418  lysosome localization
GO:0007040  lysosome organization
GO:0043410  positive regulation of MAPKKK cascade
GO:0032008  positive regulation of TOR signaling pathway
GO:0010874  regulation of cholesterol efflux
GO:0010872  regulation of cholesterol esterification
GO:0060620  regulation of cholesterol import
GO:0001919  regulation of receptor recycling

Cellular Component

GO:0005768  endosome
GO:0005794  Golgi apparatus
GO:0043231  intracellular membrane-bounded organelle
GO:0031902  late endosome membrane
GO:0005764  lysosome
GO:0016020  membrane
GO:0045121  membrane raft
GO:0005886  plasma membrane

Molecular Function

GO:0005085  guanyl-nucleotide exchange factor activity
GO:0005515  protein binding
GO:0032947  protein complex scaffold